RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 MAPK8IP1Q9UQF2 711 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.894e-7■■■□□ 16
CDC27-201ENST00000066544 VWA3AA6NCI4 1184 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 EIF5P55010 431 aaKnown RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 UBXN4Q92575 508 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 ESR2Q92731 530 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 FEZ1Q99689 392 aa9.48□□□□□ -0.89
CDC27-201ENST00000066544 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 HOOK1Q9UJC3 728 aaKnown RBP9.48□□□□□ -0.89
CDC27-201ENST00000066544 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 USP17L21D6R901 530 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 KIF2AO00139 706 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 TEX33O43247 280 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 ITPK1Q13572 414 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 IFIT1BQ5T764 474 aaKnown RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 SHISA4Q96DD7 197 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 BAG1Q99933 345 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 BLZF1Q9H2G9 400 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 LOC102724428A0A0B4J2F2 783 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 CCDC196A0A1B0GTZ2 297 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 FANCGO15287 622 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 KCNQ2O43526 872 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 VEGFAP15692 232 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 SIK1P57059 783 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 ENAHQ8N8S7 591 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 STAG1Q8WVM7 1258 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 MED15Q96RN5 788 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 LZTFL1Q9NQ48 299 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 MYH15Q9Y2K3 1946 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 A0A087X0B3 334 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 KLRK1P26718 216 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 TEX35Q5T0J7 233 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 TOGARAM2Q6ZUX3 1019 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 RNF41Q9H4P4 317 aaPredicted RBP9.47□□□□□ -0.89
CDC27-201ENST00000066544 BCL9O00512 1426 aa9.47□□□□□ -0.89
CDC27-201ENST00000066544 WDR24Q96S15 920 aa9.46□□□□□ -0.89
CDC27-201ENST00000066544 PPP2R2CQ9Y2T4 447 aa9.46□□□□□ -0.89
CDC27-201ENST00000066544 CYP2D6P10635 497 aa9.46□□□□□ -0.89
CDC27-201ENST00000066544 DDB1Q16531 1140 aa9.46□□□□□ -0.89
CDC27-201ENST00000066544 PES1O00541 588 aaKnown RBP9.46□□□□□ -0.9
CDC27-201ENST00000066544 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC27-201ENST00000066544 ERICH4A6NGS2 130 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 CCT6AP40227 531 aaKnown RBP9.46□□□□□ -0.9
CDC27-201ENST00000066544 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 CATIPQ7Z7H3 387 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
CDC27-201ENST00000066544 A0A0U1RQJ8 604 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 ATRIPQ8WXE1 791 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 EEF2KMTQ96G04 330 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 PLIN2Q99541 437 aa9.46□□□□□ -0.9
CDC27-201ENST00000066544 SEC31AO94979 1220 aaKnown RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 ANKRD18AQ8IVF6 992 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 REXO1L1PQ8IX06 675 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 FOXP1Q9H334 677 aaPredicted RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 CAMTA2O94983 1202 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 GNAT2P19087 354 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 SYCP1Q15431 976 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 CELF1Q92879 486 aaKnown RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 XBP1P17861 261 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 MCM7P33993 719 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 CLCN6P51797 869 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 TRIM65Q6PJ69 517 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 SLC51AQ86UW1 340 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 IQCA1Q86XH1 822 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 RASSF8Q8NHQ8 419 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 STK36Q9NRP7 1315 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 SPEF2Q9C093 1822 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 SOWAHDA6NJG2 315 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
CDC27-201ENST00000066544 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 SRPRBQ9Y5M8 271 aaKnown RBP9.45□□□□□ -0.9
CDC27-201ENST00000066544 ADAMTS3O15072 1205 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 POLR3GO15318 223 aaPredicted RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 ACTN4O43707 911 aaKnown RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 ATRNO75882 1429 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 KRT2P35908 639 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 NLRP5P59047 1200 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 TC2NQ8N9U0 490 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 MLKLQ8NB16 471 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 L2HGDHQ9H9P8 463 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 ZSCAN12O43309 604 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 NTSR2O95665 410 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 PTGDRQ13258 359 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 CAVIN4Q5BKX8 364 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms