RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.2
CHPF2-201ENST00000035307 UTYO14607 1347 aa13.77□□□□□ -0.2
CHPF2-201ENST00000035307 GNAT2P19087 354 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 UBE3CQ15386 1083 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF827Q17R98 1081 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
CHPF2-201ENST00000035307 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 GNG11P61952 73 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.21
CHPF2-201ENST00000035307 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
CHPF2-201ENST00000035307 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
CHPF2-201ENST00000035307 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
CHPF2-201ENST00000035307 FAM170AA1A519 330 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 KARSQ15046 597 aaKnown RBP13.76□□□□□ -0.21
CHPF2-201ENST00000035307 CYB5R4Q7L1T6 521 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 DIS3L2Q8IYB7 885 aaKnown RBP13.76□□□□□ -0.21
CHPF2-201ENST00000035307 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-201ENST00000035307 CEP131Q9UPN4 1083 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 UBA7P41226 1012 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 TOB2Q14106 344 aaPredicted RBP13.76□□□□□ -0.21
CHPF2-201ENST00000035307 KRT40Q6A162 431 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 VWA3AA6NCI4 1184 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF287Q9HBT7 754 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 NEDD4P46934 1319 aa13.76□□□□□ -0.21
CHPF2-201ENST00000035307 COBLO75128 1261 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 GDF11O95390 407 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 ATP2B4P23634 1241 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 STIM1Q13586 685 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 ARHGAP27Q6ZUM4 889 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 NWD1Q149M9 1564 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
CHPF2-201ENST00000035307 N4BP3O15049 544 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
CHPF2-201ENST00000035307 MTERF4Q7Z6M4 381 aaKnown RBP13.74□□□□□ -0.21
CHPF2-201ENST00000035307 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 BBOX1O75936 387 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF202O95125 648 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF76P36508 570 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 NAPAP54920 295 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
CHPF2-201ENST00000035307 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 BTBD18B2RXH4 712 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 SYT10Q6XYQ8 523 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
CHPF2-201ENST00000035307 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
CHPF2-201ENST00000035307 TNNI2P48788 182 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 SNAP25P60880 206 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 EVX2Q03828 476 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 DDR1Q08345 913 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 CEP89Q96ST8 783 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 PDCL3Q9H2J4 239 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 SLIT3O75094 1523 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 GSG1L2A8MUP6 293 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 KIAA1328Q86T90 577 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 TEKT1Q969V4 418 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
CHPF2-201ENST00000035307 LZTFL1Q9NQ48 299 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 KCNQ5Q9NR82 932 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
CHPF2-201ENST00000035307 CCT6AP40227 531 aaKnown RBP13.73□□□□□ -0.21
CHPF2-201ENST00000035307 USH1GQ495M9 461 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 ADGRA1Q86SQ6 560 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 KIF5BP33176 963 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 SLC16A2P36021 539 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 GPS2Q13227 327 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 PNOCQ13519 176 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
CHPF2-201ENST00000035307 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF75DP51815 510 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 SF3B3Q15393 1217 aaKnown RBP13.72□□□□□ -0.21
CHPF2-201ENST00000035307 MYSM1Q5VVJ2 828 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 CPXCR1Q8N123 301 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms