RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
RTFDC1-201ENST00000023939 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
RTFDC1-201ENST00000023939 DAGLAQ9Y4D2 1042 aa16.61■□□□□ 0.25
RTFDC1-201ENST00000023939 CDK5RAP2Q96SN8 1893 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 CERS5Q8N5B7 392 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
RTFDC1-201ENST00000023939 A0A1W2PQ27 194 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 A0A1W2PQ64 194 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 A0A1W2PQD8 194 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 PRPF3O43395 683 aaKnown RBP16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 FAM47AQ5JRC9 791 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 FLT1P17948 1338 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 MMP1P03956 469 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 BAG6P46379 1132 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 HHIPL2Q6UWX4 724 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 C16orf86Q6ZW13 317 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 PPP1R9BQ96SB3 815 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
RTFDC1-201ENST00000023939 FOCADQ5VW36 1801 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 GUCY1A2P33402 732 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 PLCD1P51178 756 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 TFAP4Q01664 338 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 CEBPZQ03701 1054 aaKnown RBP16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 ANO1Q5XXA6 986 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 ADALQ6DHV7 355 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 FOXP1Q9H334 677 aaPredicted RBP16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 MKNK2Q9HBH9 465 aa16.58■□□□□ 0.24
RTFDC1-201ENST00000023939 C10orf71Q711Q0 1435 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 CCDC173Q0VFZ6 552 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 CTCFLQ8NI51 663 aaPredicted RBP16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 ANP32BQ92688 251 aaKnown RBP16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
RTFDC1-201ENST00000023939 NMT2O60551 498 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 RASA1P20936 1047 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 SF3B2Q13435 895 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 STK38Q15208 465 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 G3V3G9 751 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 SPTLC2O15270 562 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 NR1I2O75469 434 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 XBP1P17861 261 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 CHRNA5P30532 468 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 KIF5BP33176 963 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 ME1P48163 572 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 CDK8P49336 464 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 PKN1Q16512 942 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 CCAR1Q8IX12 1150 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-201ENST00000023939 CTAGE5O15320 804 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 PPP6R2O75170 966 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 NOVP48745 357 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 GNL2Q13823 731 aaKnown RBP16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 SUPT20HQ8NEM7 779 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
RTFDC1-201ENST00000023939 CNTNAP5Q8WYK1 1306 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 TSPY3P0CV98 308 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 TSPY8P0CW00 308 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
RTFDC1-201ENST00000023939 SNW1Q13573 536 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms