RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 COA7Q96BR5 231 aa19.36■□□□□ 0.69
ERCC1-201ENST00000013807 RNF208Q9H0X6 261 aa19.36■□□□□ 0.69
ERCC1-201ENST00000013807 EHD4Q9H223 541 aa19.36■□□□□ 0.69
ERCC1-201ENST00000013807 MORF4L1Q9UBU8 362 aa19.36■□□□□ 0.69
ERCC1-201ENST00000013807 USP17L10C9JJH3 530 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 IDH1O75874 414 aaKnown RBP19.35■□□□□ 0.69
ERCC1-201ENST00000013807 HLA-DOAP06340 250 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 MAP3K12Q12852 859 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 AACSQ86V21 672 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 CRACR2BQ8N4Y2 399 aaPredicted RBP19.35■□□□□ 0.69
ERCC1-201ENST00000013807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERCC1-201ENST00000013807 ANTXR1Q9H6X2 564 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 ZBTB40Q9NUA8 1239 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 GJD2Q9UKL4 321 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 TRIOBPQ9H2D6 2365 aa19.35■□□□□ 0.69
ERCC1-201ENST00000013807 SGPL1O95470 568 aa19.34■□□□□ 0.69
ERCC1-201ENST00000013807 MTMR2Q13614 643 aa19.34■□□□□ 0.69
ERCC1-201ENST00000013807 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
ERCC1-201ENST00000013807 PAK6Q9NQU5 681 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-201ENST00000013807 BIN2Q9UBW5 565 aaPredicted RBP19.34■□□□□ 0.69
ERCC1-201ENST00000013807 ZBTB21Q9ULJ3 1066 aa19.34■□□□□ 0.69
ERCC1-201ENST00000013807 DDX19BQ9UMR2 479 aa19.34■□□□□ 0.69
ERCC1-201ENST00000013807 TTF1Q15361 905 aaPredicted RBP19.33■□□□□ 0.68
ERCC1-201ENST00000013807 SIRT2Q8IXJ6 389 aa19.33■□□□□ 0.68
ERCC1-201ENST00000013807 U2AF1L4Q8WU68 220 aaKnown RBP19.33■□□□□ 0.68
ERCC1-201ENST00000013807 RIOK1Q9BRS2 568 aaKnown RBP19.33■□□□□ 0.68
ERCC1-201ENST00000013807 UNC93B1Q9H1C4 597 aa19.33■□□□□ 0.68
ERCC1-201ENST00000013807 MYH7P12883 1935 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 INHAP05111 366 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 ELNP15502 786 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 CLASRPQ8N2M8 674 aaKnown RBP19.32■□□□□ 0.68
ERCC1-201ENST00000013807 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 C12orf42Q96LP6 360 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 TRIM34Q9BYJ4 488 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 TMOD4Q9NZQ9 345 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 SERPINB13Q9UIV8 391 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 NDUFB9Q9Y6M9 179 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 NAV1Q8NEY1 1877 aa19.32■□□□□ 0.68
ERCC1-201ENST00000013807 RANBP2P49792 3224 aaKnown RBP19.31■□□□□ 0.68
ERCC1-201ENST00000013807 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-201ENST00000013807 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
ERCC1-201ENST00000013807 P2RX7Q99572 595 aaKnown RBP19.31■□□□□ 0.68
ERCC1-201ENST00000013807 CRISPLD2Q9H0B8 497 aa19.31■□□□□ 0.68
ERCC1-201ENST00000013807 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
ERCC1-201ENST00000013807 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
ERCC1-201ENST00000013807 MYH8P13535 1937 aa19.31■□□□□ 0.68
ERCC1-201ENST00000013807 RAB11FIP3O75154 756 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 HMMRO75330 724 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 GDF11O95390 407 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 USP5P45974 858 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 HERVK_113P62684 666 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 IRX3P78415 501 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-201ENST00000013807 GTF3C2Q8WUA4 911 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-201ENST00000013807 IL1RAPL2Q9NP60 686 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 TAOK2Q9UL54 1235 aa19.3■□□□□ 0.68
ERCC1-201ENST00000013807 H0YGN5 161 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 GABPAQ06546 454 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 USP17L2Q6R6M4 530 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 HTATIP2Q9BUP3 242 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 RBPJLQ9UBG7 517 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 ALPK3Q96L96 1907 aa19.29■□□□□ 0.68
ERCC1-201ENST00000013807 GH2P01242 217 aa19.28■□□□□ 0.68
ERCC1-201ENST00000013807 XRCC5P13010 732 aaKnown RBP19.28■□□□□ 0.68
ERCC1-201ENST00000013807 SLC9C2Q5TAH2 1124 aa19.28■□□□□ 0.68
ERCC1-201ENST00000013807 GPRC5AQ8NFJ5 357 aa19.28■□□□□ 0.68
ERCC1-201ENST00000013807 TXNRD2Q9NNW7 524 aa19.28■□□□□ 0.68
ERCC1-201ENST00000013807 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
ERCC1-201ENST00000013807 MAGEB6P1A0A0J9YX57 407 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 TCRBV5S4A2TA0A5A2 114 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 HMGCRP04035 888 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 PDE6AP16499 860 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 SHMT1P34896 483 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 PLCD1P51178 756 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 CERKLQ49MI3 558 aaPredicted RBP19.27■□□□□ 0.68
ERCC1-201ENST00000013807 POTEEQ6S8J3 1075 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 KIAA1683Q9H0B3 1180 aa19.27■□□□□ 0.68
ERCC1-201ENST00000013807 COLQQ9Y215 455 aaPredicted RBP19.27■□□□□ 0.68
ERCC1-201ENST00000013807 BAZ2AQ9UIF9 1905 aaKnown RBP19.27■□□□□ 0.67
ERCC1-201ENST00000013807 RLFQ13129 1914 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 FARP2O94887 1054 aaPredicted RBP19.26■□□□□ 0.67
ERCC1-201ENST00000013807 LBX2Q6XYB7 198 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 ANKLE1Q8NAG6 615 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 USP6NLQ92738 828 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 DEFB118Q96PH6 123 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
ERCC1-201ENST00000013807 RPTORQ8N122 1335 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 IFIT2P09913 472 aaKnown RBP19.25■□□□□ 0.67
ERCC1-201ENST00000013807 ATP5JP18859 108 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 MAPK4P31152 587 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 FXR1P51114 621 aaKnown RBP eCLIP19.25■□□□□ 0.67
ERCC1-201ENST00000013807 USP14P54578 494 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 ERVK-9P63128 1117 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 ERVK-24P63145 666 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 PDE3AQ14432 1141 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 ABCB5Q2M3G0 1257 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 Q3C1V9 767 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 MAP3K21Q5TCX8 1036 aa19.25■□□□□ 0.67
ERCC1-201ENST00000013807 SOCS4Q8WXH5 440 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms