RNA–Protein interactions for RNA: ENSMUST00000220578.1

Srp54a-202, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54a, Length 4,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54a-202ENSMUST00000220578 Gm5935Q497S0 212 aa13.94□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Jade3Q6IE82 823 aa13.94□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Lrp2bpQ9D4C6 346 aa13.94□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Cdc42bpaQ3UU96 1719 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Usp42B2RQC2 1324 aaKnown RBP13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 A0A1W2P6Q8 802 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Gm9048A0A1W2P7H4 802 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 A0A1W2P7Z8 802 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Gm9046A0A1W2P855 802 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 NpeppsQ11011 920 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ccdc129Q14B48 1034 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Psmd1Q3TXS7 953 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 CtcfQ61164 736 aaKnown RBP13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ccdc83Q9D4V3 305 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ehd4Q9EQP2 541 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Suclg2Q9Z2I8 433 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 CemipQ8BI06 1361 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Dnajc25A2ALW5 357 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 XpcP51612 930 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Frat1P70339 274 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Rbm15bQ6PHZ5 887 aaKnown RBP13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 IcoslgQ9JHJ8 322 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Efcc1Q9JJF6 558 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Mx2Q9WVP9 655 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Pde4aO89084 844 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Gtpbp6Q3U6U5 514 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ccdc148Q6P5U8 527 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Krt9Q6RHW0 743 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Lrsam1Q80ZI6 727 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Bbs9Q811G0 885 aa13.93□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Gucy1b3O54865 620 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Nyap1Q6PFX7 833 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Tubb4aQ9D6F9 444 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Skor2A7M7C7 1008 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Madcam1Q61826 405 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Wdr24Q8CFJ9 790 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Tmco5aQ9D9D5 303 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Trmt112Q9DCG9 125 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Myl7Q9QVP4 175 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Fyb2A2A995 729 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Cd3dP04235 173 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Traf3ip3Q8C0G2 513 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Acot11Q8VHQ9 594 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Med23Q80YQ2 1367 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Fam107bQ3TGF2 131 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Slc44a1Q6X893 653 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Zscan22Q8BGS5 496 aa13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 StrbpQ91WM1 672 aaKnown RBP13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Tpd52l2Q9CYZ2 220 aaKnown RBP13.92□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ccdc121E9Q6D3 323 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Krt13P08730 437 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 DnttP09838 530 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Vat1lQ80TB8 417 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ttll4Q80UG8 1193 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ubxn1Q922Y1 297 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Zfp51Q3U4L8 781 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Camsap3Q80VC9 1252 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 DohhA0A1Y7VJ29 135 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Gas7Q60780 421 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Tubgcp2Q921G8 905 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Xpo4Q9ESJ0 1151 aa13.91□□□□□ -0.18
Srp54a-202ENSMUST00000220578 ByslO54825 436 aaKnown RBP13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Smc1aQ9CU62 1233 aaKnown RBP13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Med10Q9CXU0 135 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Galnt15Q9D2N8 638 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 A0A1Y7VML8 143 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Zfp781Q0P5U5 243 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 GnptabQ69ZN6 1235 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Acap3Q6NXL5 833 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Slc7a6osQ7TPE5 306 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ybx3Q9JKB3 361 aaKnown RBP13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 MypnQ5DTJ9 1315 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 LdhbP16125 334 aaKnown RBP13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 KhnynQ80U38 671 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Ublcp1Q8BGR9 318 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 NelfbQ8C4Y3 580 aa13.9□□□□□ -0.18
Srp54a-202ENSMUST00000220578 Znf568E9PYI1 671 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Sept1P42209 366 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 VmacQ8BP01 174 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Dclk3Q8BWQ5 790 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Pym1Q8CHP5 203 aaKnown RBP13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Shtn1Q8K2Q9 631 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Rps6ka4Q9Z2B9 773 aa13.9□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Otud7bB2RUR8 840 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Usp53P15975 1069 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Celf1P28659 486 aaKnown RBP13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Senp1P59110 640 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Smarcad1Q04692 1021 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 B4galnt4Q766D5 1034 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Ccdc25Q78PG9 208 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Fbxo11Q7TPD1 930 aaKnown RBP13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Tfap4Q9JIZ5 338 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Ercc6l2Q9JIM3 1537 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Ca8P28651 291 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Mcm5P49718 733 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 GalcP54818 684 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Gpr162Q3UN16 588 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Maip1Q8BHE8 291 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 Dnajc5gQ8C632 165 aa13.89□□□□□ -0.19
Srp54a-202ENSMUST00000220578 NkapQ9D0F4 415 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms