RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Cavin1O54724 392 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Epb41l2O70318 988 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 MarcksP26645 309 aaKnown RBP10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Eya3P97480 510 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Sec23aQ01405 765 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 LrmpQ60664 539 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Slitrk3Q810B9 980 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pcdhb15Q91Y04 786 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nfe2l3Q9WTM4 660 aa10.94□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Sycp2lA0A0M3U1B0 842 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Sirt2Q8VDQ8 389 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Slc44a4Q91VA1 707 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Myh7Q91Z83 1935 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Lrp5Q91VN0 1614 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Klf15Q9EPW2 415 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Cyp3a25O09158 503 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Fam178bQ24JP3 464 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Mdh1bQ5F204 500 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Map3k12Q60700 888 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Krt82Q99M74 516 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Adgra3Q7TT36 1310 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Dhx8A2A4P0 1244 aaKnown RBP10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Vmn2r68L7N2B3 851 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 U2af2P26369 475 aaKnown RBP10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Bend4P86174 541 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ppp4cP97470 307 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ankrd1Q9CR42 319 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Eif4enif1Q9EST3 983 aaKnown RBP10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Kcnh3Q9WVJ0 1095 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tulp1Q9Z273 543 aa10.93□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Fam186bD3Z420 943 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nfil3O08750 462 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Rpusd2Q149F1 553 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tacc1Q6Y685 774 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Dusp9Q7TNL7 452 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Il7P10168 154 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tmem109Q3UBX0 243 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 WdpcpQ8C456 722 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Mtmr2Q9Z2D1 643 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Homer1Q9Z2Y3 366 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Kansl3A2RSY1 903 aaKnown RBP10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Zscan18E9PUD6 809 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 PparaP23204 468 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Scg2Q03517 617 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Usp50Q6P8X6 390 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ndufv1Q91YT0 464 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Bap1Q99PU7 728 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Mei1Q9D4I2 1268 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Gpaa1Q9WTK3 621 aa10.92□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Grem2O88273 168 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ano10Q8BH79 659 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Slu7Q8BHJ9 585 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Galntl5Q9D4M9 431 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Syt10Q9R0N4 523 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Klhl34A2AI76 644 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Anp32cQ64G17 123 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ift74Q8BKE9 600 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Cdan1Q8CC12 1239 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Myoz2Q9JJW5 264 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Hip1rQ9JKY5 1068 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tbc1d2bQ3U0J8 965 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pdcl2Q78Y63 240 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Cdk8Q8R3L8 464 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Aox4Q3TYQ9 1336 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ccdc85cE9Q6B2 420 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Atp2b1G5E829 1220 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Nat10Q8K224 1024 aaKnown RBP10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Hexim1Q8R409 356 aaKnown RBP10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Tspyl4Q8VD63 406 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Snw1Q9CSN1 536 aaKnown RBP10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Dusp10Q9ESS0 483 aa10.91□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pnpla6Q3TRM4 1355 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 LdhaP06151 332 aaKnown RBP10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ftl1P29391 183 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Aak1Q3UHJ0 959 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 1700018B08RikQ9DA83 213 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Gm30191A0A0U1RNT7 187 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Pramel3A2AHA7 463 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Gm7903A2AWL1 463 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 AV320801A2AWL3 467 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Gm15023L7MUB4 467 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Armc2Q3URY6 854 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Best3Q6H1V1 669 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Lzts2Q91YU6 671 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Znf609Q8BZ47 1413 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 A0A0U1RNP2 1173 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 SsbP32067 415 aaKnown RBP10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Epha2Q03145 977 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Ddx31Q6NZQ2 687 aaKnown RBP10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Glis3Q6XP49 780 aa10.9□□□□□ -0.66
Sh3rf1-202ENSMUST00000209611 Kif23E9Q5G3 953 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Chrna5Q2MKA5 467 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Pank2Q3U4S0 443 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Pex1Q5BL07 1284 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Large2Q5XPT3 690 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 GnptabQ69ZN6 1235 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Pcdhb14Q6PB90 796 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Q8BZJ8 459 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mical1Q8VDP3 1048 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 CebpaP53566 359 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms