RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 TbcaP48428 108 aaKnown RBP9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Gnat2P50149 354 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Lrrc24Q8BHA1 521 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Alx1Q8C8B0 326 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Vmn1r199Q8R280 367 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Dnajc14Q921R4 703 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Aldh1b1Q9CZS1 519 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Upf1Q9EPU0 1124 aaKnown RBP9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 S1pr4Q9Z0L1 386 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Prr14lE9Q7C4 1971 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Mmp10O55123 476 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Bace1P56818 501 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Eya3P97480 510 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Sp4Q62445 782 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Bap1Q99PU7 728 aa9.83□□□□□ -0.84
Trim39-205ENSMUST00000173369 Usp42B2RQC2 1324 aaKnown RBP9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pcdh15Q99PJ1 1943 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 VegfbP49766 207 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Gas1Q01721 343 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ccdc158Q8CDI6 1109 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Prkab1Q9R078 270 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Vmn2r68L7N2B3 851 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Q3TYL0 343 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zfp953Q3UPV7 304 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ppp1r1bQ60829 194 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Usp44Q8C2S0 711 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 CerkQ8K4Q7 531 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 GrapQ9CX99 217 aa9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Telo2Q9DC40 840 aaKnown RBP9.82□□□□□ -0.84
Trim39-205ENSMUST00000173369 Myh6Q02566 1938 aaKnown RBP9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 D630036H23RikQ3UQD6 204 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Micall1Q8BGT6 870 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Slx4ipQ9D7Y9 413 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pes1Q9EQ61 584 aaKnown RBP9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zmym2Q9CU65 1376 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Mdh1bQ5F204 500 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ipo8Q7TMY7 1010 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 9230110C19RikQ8CC70 267 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 C8aQ8K182 587 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Adam1bQ8R534 806 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Apbb1ipQ8R5A3 670 aa9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Rbm6S4R1W5 1118 aaKnown RBP9.81□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zkscan16A2ALW2 728 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zbtb21E9Q444 1094 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Cd3dP04235 173 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ftl1P29391 183 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Brip1Q5SXJ3 1174 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Cog5Q8C0L8 829 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Phf14Q9D4H9 881 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Eid1Q9DCR4 169 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Clip2Q9Z0H8 1047 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Trpm7Q923J1 1863 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Fam186bD3Z420 943 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Sema3fO88632 785 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 ThbdP15306 577 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ms4a2P20490 235 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Alppl2P24823 529 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Fdx1P46656 188 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ccdc174Q3U155 467 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ncbp1Q3UYV9 790 aaKnown RBP9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Zfp341Q6PGC9 846 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Spata21Q8BHW6 681 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ift74Q8BKE9 600 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Acot3Q9QYR7 432 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Suclg2Q9Z2I8 433 aa9.8□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pkp1P97350 728 aaKnown RBP9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Glra4Q61603 456 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Phf20l1Q8CCJ9 1013 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Gbp7Q91Z40 638 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Gm29094F6Q785 221 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Usp5P56399 858 aaKnown RBP9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Gjb2Q00977 226 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Rnf20Q5DTM8 973 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Fsd2Q8BZ52 692 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Sulf1Q8K007 870 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Slc18a1Q8R090 521 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Prr16A3KMN5 304 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Dnajb6O54946 365 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Eps15P42567 897 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 DymQ8CHY3 669 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Fam205a1D3YZF6 1314 aa9.79□□□□□ -0.84
Trim39-205ENSMUST00000173369 Snap25P60879 206 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Sap30bpQ02614 308 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 1700013D24RikQ0P521 120 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Atrnl1Q6A051 1378 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ddx55Q6ZPL9 600 aaKnown RBP9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ireb2Q811J3 963 aaKnown RBP9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Slc4a7Q8BTY2 1034 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 ImmtQ8CAQ8 757 aaKnown RBP9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Pof1bQ8K4L4 587 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Atf7Q8R0S1 413 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Mrpl50Q8VDT9 159 aaKnown RBP9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Krt84Q99M73 603 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Cep350E9Q309 3095 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 NrapQ80XB4 1728 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 1700017N19RikA0A087WPJ1 469 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Ces1hD3Z298 562 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Cyp3a59D3Z2W7 503 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Magea8O89012 320 aa9.78□□□□□ -0.84
Trim39-205ENSMUST00000173369 Hoxa7P02830 229 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms