RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Sclt1G5E861 688 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 RilpQ5ND29 369 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Cct6bQ61390 531 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Acot11Q8VHQ9 594 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Krt20Q9D312 431 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Erbb4Q61527 1308 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Becn2P0DM65 447 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Znf667Q2TL60 609 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ppp2r2cQ8BG02 447 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Znf830Q8R1N0 363 aaKnown RBP17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Gm20425E9Q035 978 aaKnown RBP17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 SrprbP47758 269 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 CoilQ5SU73 570 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Rimbp2Q80U40 1072 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Thap12Q9CUX1 758 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Igsf1Q7TQA1 1317 aa17.24■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 1700113H08RikE9Q9Q5 327 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ets1P27577 440 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ftl2P49945 183 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Fgd5Q80UZ0 1219 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Slc17a8Q8BFU8 601 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tfcp2Q9ERA0 502 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 NpatQ8BMA5 1420 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Mapkapk5O54992 473 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Drc1Q3USS3 753 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Cdcp1Q5U462 833 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Zbtb38Q3LR78 1197 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Atp2b4Q6Q477 1205 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Kcnk13Q8R1P5 405 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Golga1Q9CW79 758 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ap1b1O35643 943 aaKnown RBP17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Rfc1P35601 1131 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Dhx38Q80X98 1228 aa17.23■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tdo2P48776 406 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 VrtnQ3SYK4 740 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Stxbp3Q60770 592 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Rhpn1Q61085 643 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Bend3Q6PAL0 825 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Slc51bQ80WK2 128 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Naa25Q8BWZ3 972 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Lonp1Q8CGK3 949 aaKnown RBP17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tubgcp2Q921G8 905 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Syde2E9PUP1 1314 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Anks6Q6GQX6 883 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Slc7a6osQ7TPE5 306 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Foxp4Q9DBY0 795 aaKnown RBP17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Dnajc25A2ALW5 357 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tcp1P11983 556 aaKnown RBP17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 NfkbibQ60778 359 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Mpp4Q6P7F1 635 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Klhl7Q8BUL5 586 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Apol10aQ8CCA5 318 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Slc4a8Q8JZR6 1089 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tmem132aQ922P8 1018 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tnpo2Q99LG2 887 aaKnown RBP17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 CpvlQ9D3S9 478 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Kif21bQ9QXL1 1668 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 1700029H14RikE9PY36 240 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Cct5P80316 541 aaKnown RBP17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tbc1d9bQ5SVR0 1263 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Armcx3Q8BHS6 379 aa17.22■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Hspd1P63038 573 aaKnown RBP17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 RragaQ80X95 313 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Cyp26a1O55127 497 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ddx49Q4FZF3 480 aaKnown RBP17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Tmem119Q8R138 280 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Ssx2ipQ8VC66 615 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Pcdhb2Q91Y00 799 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Cdca7lQ922M5 438 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Myl7Q9QVP4 175 aa17.21■□□□□ 0.35
Pcdha9-201ENSMUST00000115659 Armc3A2AU72 881 aa17.21■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Snap23O09044 210 aa17.21■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gm5168Q4KL04 211 aa17.21■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 SphkapQ6NSW3 1687 aa17.21■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Bola3Q8CEI1 110 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gimap7Q8R379 293 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ddx41Q91VN6 622 aaKnown RBP17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gngt1Q61012 74 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Kcna6Q61923 529 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Riox2Q8CD15 465 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Rbm43Q99J64 343 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Actn2Q9JI91 894 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Ccdc13D3YV10 709 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Rad23aP54726 363 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Psmc4P54775 418 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Trim68Q8K243 485 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Plekhg1F6S200 1446 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Atf5O70191 283 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pls1Q3V0K9 630 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Eme2Q56A04 373 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 PicalmQ7M6Y3 660 aaKnown RBP17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pdzd4Q9QY39 772 aa17.2■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Dnm2P39054 870 aaKnown RBP17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 NppbP40753 121 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Swap70Q6A028 585 aaKnown RBP17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Iws1Q8C1D8 766 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Dnajc5bQ9CQ94 199 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Acsl3Q9CZW4 720 aaKnown RBP17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Acot10Q32MW3 439 aa17.19■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Fkbp3Q62446 224 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms