RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 NefhP19246 1090 aa28.57■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Sept2P42208 361 aaKnown RBP28.57■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Zfp341Q6PGC9 846 aa28.57■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Mbtps2Q8CHX6 515 aa28.57■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Lrrfip2Q91WK0 415 aa28.57■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Cd3dP04235 173 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Ccnd3P30282 292 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Hspa8P63017 646 aaKnown RBP28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 WasP70315 520 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Eya3P97480 510 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Acap3Q6NXL5 833 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 FAM186AQ9D9R9 1790 aa28.56■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Slc1a4O35874 532 aa28.55■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Fgfr2P21803 821 aa28.55■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Slc16a10Q3U9N9 512 aa28.55■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Calhm4Q8CE93 315 aa28.55■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Usp14Q9JMA1 493 aaKnown RBP28.55■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Zc3h4Q6ZPZ3 1304 aaKnown RBP28.54■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Rexo5D3YW29 759 aa28.54■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Ythdc1E9Q5K9 736 aaKnown RBP28.54■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Kank4Q6P9J5 1016 aa28.54■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Tdrd1Q99MV1 1172 aa28.54■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Gm36210A0A1B0GS00 229 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Fam83hQ148V8 1209 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Prr7Q3V0I2 269 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 WaplQ65Z40 1200 aaKnown RBP28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Ubxn10Q8BG34 277 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Rnf41Q8BH75 317 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Itm2cQ91VK4 269 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Fsip1Q9D3V5 435 aa28.53■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 MyocdQ8VIM5 935 aa28.52■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 RragcQ99K70 398 aa28.52■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Vta1Q9CR26 309 aa28.52■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Mkrn1Q9QXP6 481 aa28.52■■■□□ 2.16
Ccdc50-202ENSMUST00000096127 Anapc15-psA0A140T8L6 141 aa28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Sema3fO88632 785 aa28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Rc3h1Q4VGL6 1130 aaKnown RBP28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 ImmtQ8CAQ8 757 aaKnown RBP28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Tomm22Q9CPQ3 142 aa28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Ngly1Q9JI78 651 aa28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Efcc1Q9JJF6 558 aa28.51■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Atp8b3Q6UQ17 1335 aa28.5■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Casp12O08736 419 aa28.5■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Ppp6r3Q922D4 844 aa28.5■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Akap8Q9DBR0 687 aaKnown RBP28.5■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Tcof1O08784 1320 aaKnown RBP28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Hand2Q61039 217 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 B4galnt3Q6L8S8 986 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Otop3Q80UF9 577 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Mov10l1Q99MV5 1187 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 EspnQ9ET47 871 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Syt5Q9R0N5 386 aa28.49■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Zscan18E9PUD6 809 aa28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Nucb1Q02819 459 aaKnown RBP28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Scfd1Q8BRF7 639 aaKnown RBP28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Shisa4Q8CA71 197 aa28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 OplahQ8K010 1288 aa28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Nup133Q8R0G9 1155 aa28.48■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Rad50P70388 1312 aa28.47■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Dock5B2RY04 1868 aa28.47■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Usp44Q8C2S0 711 aa28.47■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Mtmr4Q91XS1 1190 aa28.47■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Srgap1Q91Z69 1062 aa28.47■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 SelpQ01102 768 aa28.46■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 PcQ05920 1178 aa28.46■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Olfm4Q3UZZ4 505 aa28.46■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Traf7Q922B6 594 aa28.46■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Eid1Q9DCR4 169 aa28.46■■■□□ 2.15
Ccdc50-202ENSMUST00000096127 Q3UK37 420 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ifit2Q64112 472 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Cnot6lQ8VEG6 555 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Krt84Q99M73 603 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Prkab1Q9R078 270 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Clip2Q9Z0H8 1047 aa28.45■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Usp42B2RQC2 1324 aaKnown RBP28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Tbc1d8bA3KGB4 1114 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Prl7a2O54831 253 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Eps15P42567 897 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ercc3P49135 783 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Cnnm2Q3TWN3 875 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Spty2d1Q68FG3 682 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Bri3bpQ8BXV2 253 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ttll1Q91V51 423 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Zmym2Q9CU65 1376 aa28.44■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Znf638Q61464 1960 aaKnown RBP28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Cyp2b10P12791 500 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ftl1P29391 183 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 RubcnlQ3TD16 648 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Rgl2Q61193 778 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Glra4Q61603 456 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Slc18a1Q8R090 521 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ak2Q9WTP6 239 aa28.43■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Rbm8a2A0A0N4SUH6 174 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Cyp3a59D3Z2W7 503 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Ccdc174Q3U155 467 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Dync1li2Q6PDL0 492 aaKnown RBP28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Tekt3Q6X6Z7 490 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 QarsQ8BML9 775 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Rassf8Q8CJ96 419 aa28.42■■■□□ 2.14
Ccdc50-202ENSMUST00000096127 Arhgef6Q8K4I3 771 aa28.42■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms