RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Necab1Q8BG18 352 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sh2b1Q91ZM2 756 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fam84aQ9D650 292 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Polr2dQ9D7M8 142 aaKnown RBP9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cbx8Q9QXV1 362 aa9.33□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gm21671G3UY31 267 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Nek1P51954 1203 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Emc10Q3TAS6 258 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Nab2Q61127 525 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ift88Q61371 824 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fmnl3Q6ZPF4 1028 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cct8l1Q80YT3 562 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Hpcal4Q8BGZ1 191 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Q8C1R3 189 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Epc1Q8C9X6 813 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ciao1Q99KN2 339 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Paip2Q9D6V8 124 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 AvenQ9D9K3 342 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 MmeQ61391 750 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Clec16aQ80U30 1036 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zbtb43Q9DAI4 467 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 TnrQ8BYI9 1358 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tjp1P39447 1745 aaKnown RBP9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tdo2P48776 406 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Mybl1P51960 751 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Evi5P97366 809 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tubb5P99024 444 aaKnown RBP9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gucy2cQ3UWA6 1072 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Prdm1Q60636 856 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Snd1Q78PY7 910 aaKnown RBP9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Krt222Q8CCX5 294 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ssh3Q8K330 649 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Eif3cQ8R1B4 911 aaKnown RBP9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 NenfQ9CQ45 171 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 RabggtaQ9JHK4 567 aa9.32□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sem1P60897 70 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Dusp9Q7TNL7 452 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ctdspl2Q8BG15 465 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Anks1bQ8BIZ1 1259 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pdzrn4E9PUZ9 1014 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zbtb21E9Q444 1094 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 TsksO54887 585 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Lrrc6O88978 473 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pip4k2bQ80XI4 416 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Nop9Q8BMC4 636 aaKnown RBP9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pde5aQ8CG03 865 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Gtpbp10Q8K013 366 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Fbxo18Q8K2I9 1042 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Arhgef6Q8K4I3 771 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Spata1Q9D5R4 444 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cfap45Q9D9U9 551 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Nwd2Q6P5U7 1742 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cyp3a59D3Z2W7 503 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Acad12D3Z7X0 555 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rsph10bE9PYQ0 876 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Lipo1J3QME6 396 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Kifc2O08672 792 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Hnrnph1O35737 449 aaKnown RBP9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Myd88P22366 296 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Psmb7P70195 277 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Smarcc1P97496 1104 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Llgl2Q3TJ91 1027 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ift122Q6NWV3 1182 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Cfap100Q80VN0 613 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Erlin2Q8BFZ9 340 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rbbp5Q8BX09 538 aaKnown RBP9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Trim52Q8CDV4 233 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Wasf1Q8R5H6 559 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rrp1bQ91YK2 724 aaKnown RBP9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Krt23Q99PS0 422 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sil1Q9EPK6 465 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Eif2ak3Q9Z2B5 1114 aa9.31□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Abca3Q8R420 1704 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Tbc1d2B1AVH7 922 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sox5P35710 763 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ell2Q3UKU1 639 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Mylk4Q5SUV5 386 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zranb3Q6NZP1 1069 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ccdc93Q7TQK5 629 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ankrd23Q812A3 306 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Zswim4Q8C7B8 1101 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Krt84Q99M73 603 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 NapgQ9CWZ7 312 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Q9CYI0 393 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Abt1Q9QYL7 269 aaKnown RBP9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 IncenpQ9WU62 880 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Brwd3A2AHJ4 1799 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Foxp1P58462 705 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Phactr1Q2M3X8 580 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Asic4Q7TNS7 539 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Olfr119Q7TRJ5 321 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Map10Q8BJS7 891 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Alx1Q8C8B0 326 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Sgsm3Q8VCZ6 750 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Ttc30a2A2AKQ8 664 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pde6aP27664 859 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Vsnl1P62761 191 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Pex1Q5BL07 1284 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Rps6ka6Q7TPS0 764 aa9.3□□□□□ -0.92
Cdc40-201ENSMUST00000044166 Lrrc1Q80VQ1 524 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms