RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ppp2r3aB2RXC8 1150 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Hsp90b1P08113 802 aaKnown RBP13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Tnni2P13412 182 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Usp53P15975 1069 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Fgfr2P21803 821 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Gba2Q69ZF3 918 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Zfp341Q6PGC9 846 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ubxn10Q8BG34 277 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Itm2cQ91VK4 269 aa13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Tfip11Q9ERA6 838 aaKnown RBP13.54□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ugt1a5B2RT14 529 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Prl7a2O54831 253 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 MecomP14404 1042 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Eya3P97480 510 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Fam83hQ148V8 1209 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Traf7Q922B6 594 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Ppp6r3Q922D4 844 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Mov10l1Q99MV5 1187 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Mlh1Q9JK91 760 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 Plcg1Q62077 1302 aa13.53□□□□□ -0.24
Ccdc28b-201ENSMUST00000030586 A0A1W2P6Q8 802 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Gm9048A0A1W2P7H4 802 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 A0A1W2P7Z8 802 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Gm9046A0A1W2P855 802 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Pus7B7ZNL8 666 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Mfap1aC0HKD8 439 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Mfap1bC0HKD9 439 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Cd3dP04235 173 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Cyp2b10P12791 500 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ftl1P29391 183 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Mybl2P48972 704 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Nbr1P97432 988 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Eme2Q56A04 373 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Dync1li2Q6PDL0 492 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Usp44Q8C2S0 711 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Top1mtQ8R4U6 593 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Styxl1Q9DAR2 321 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Nudt12Q9DCN1 462 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 PhaxQ9JJT9 385 aaKnown RBP13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Prkab1Q9R078 270 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Pmfbp1Q9WVQ0 1022 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Zmym2Q9CU65 1376 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Lamb1P02469 1786 aa13.52□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Med23Q80YQ2 1367 aa13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Nmt2O70311 529 aa13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Map7O88735 730 aa13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Lamp1P11438 406 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Nucb1Q02819 459 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 KnstrnQ9D9Z1 312 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 OgdhlE9Q7L0 1029 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Casp12O08736 419 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Hap1O35668 628 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Dcaf15Q6PFH3 600 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Nup133Q8R0G9 1155 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Gimap3Q99MI6 301 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 MsraQ9D6Y7 233 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ngly1Q9JI78 651 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ak2Q9WTP6 239 aa13.5□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Dicer1Q8R418 1916 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 A430078G23RikE9Q7Y4 484 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Slc1a4O35874 532 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 NefhP19246 1090 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Kif20aP97329 887 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 RubcnlQ3TD16 648 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ifit2Q64112 472 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 WaplQ65Z40 1200 aaKnown RBP13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Fndc3bQ6NWW9 1207 aaKnown RBP13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ift74Q8BKE9 600 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ildr1Q8CBR1 537 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Mtmr4Q91XS1 1190 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Sapcd2Q9D818 391 aa13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Akap8Q9DBR0 687 aaKnown RBP13.49□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Usp42B2RQC2 1324 aaKnown RBP13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Atp8b3Q6UQ17 1335 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Disp2Q8CIP5 1345 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Rbm8a2A0A0N4SUH6 174 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 MccE9PWI3 1003 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 B020004C17RikJ3QP07 232 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Cyp2d34L7N463 504 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Q3UK37 420 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Glra4Q61603 456 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Spty2d1Q68FG3 682 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Tacc1Q6Y685 774 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Slc45a1Q8BIV7 751 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Tshz3Q8CGV9 1081 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Slc18a1Q8R090 521 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 C1qtnf12Q8R2Z0 308 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Cnot6lQ8VEG6 555 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Tdrd1Q99MV1 1172 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Rbm8aQ9CWZ3 174 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Eid1Q9DCR4 169 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Sil1Q9EPK6 465 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Brca1P48754 1812 aa13.48□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Cyp3a59D3Z2W7 503 aa13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Slc16a10Q3U9N9 512 aa13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Usp50Q6P8X6 390 aa13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ubap2lQ80X50 1107 aaKnown RBP13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Scfd1Q8BRF7 639 aaKnown RBP13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Defb15Q8R2I5 79 aa13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Tomm22Q9CPQ3 142 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms