RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Plagl1Q9JLQ4 704 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Adcy10Q8C0T9 1614 aa11.24□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Parp2O88554 559 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Tmem143Q8VD26 458 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Eef1gQ9D8N0 437 aaKnown RBP11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Myo3bQ1EG27 1305 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Trim37Q6PCX9 961 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Stac3Q8BZ71 360 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Kif2cQ922S8 721 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mfap3Q922T2 349 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 RpainQ9CWY9 219 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 NeblQ0II04 452 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nlrp2Q4PLS0 1046 aaKnown RBP11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mum1l1Q4VA55 681 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cd274Q9EP73 290 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Kifc2O08672 792 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ccdc87Q8CDL9 855 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Dync1i2O88487 612 aaKnown RBP11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nlrp1aQ2LKU9 1182 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 RragaQ80X95 313 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Fam204aQ8C6C7 236 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Kiaa1107Q80TK0 1369 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nr1d1Q3UV55 615 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Tekt2Q922G7 430 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Fam217aQ9D9W6 419 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Trpc3Q9QZC1 836 aa11.23□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Serpinb6eI7HJI3 429 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ca8P28651 291 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gpbp1Q6NXH3 473 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Stk38lQ7TSE6 464 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Adcy2Q80TL1 1090 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 E330017A01RikQ8BU47 192 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rsad2Q8CBB9 362 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Trim68Q8K243 485 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Slc26a7Q8R2Z3 656 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cabp5Q9JLK3 173 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Talpid3E9PV87 1520 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Znf521Q6KAS7 1311 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm5936A2BG95 728 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm5640A3KG49 728 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Speer2E9Q9U2 264 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Dcaf17Q3TUL7 519 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Trim28Q62318 834 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Amotl2Q8K371 772 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Zcchc8Q9CYA6 709 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lmo7E9PYF4 1699 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Serpini1O35684 410 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Slc38a10Q5I012 1090 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Sh3gl3Q62421 347 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Rexo1Q7TT28 1213 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ttc14Q9CSP9 761 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Pdcd6ipQ9WU78 869 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mast1Q9R1L5 1570 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gsta4P24472 222 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lrriq3Q14DL3 633 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ifit1bl2Q3U687 466 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 EspnlQ3UYR4 1005 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Cbx6Q9DBY5 414 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 HnrnpcQ9Z204 313 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 IntuQ059U7 942 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ppp1r13bQ62415 1087 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nek9Q8K1R7 984 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Efcab2Q9CQ46 164 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gbp6A0A0G2JDV3 611 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Gm43302L7N1X8 611 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Ifit1Q64282 463 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Slc14a2Q8R4T9 930 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Copb1Q9JIF7 953 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Prr16A3KMN5 304 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Mei4Q8BRM6 389 aa11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 AdarQ99MU3 1178 aaKnown RBP11.22□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Pla2g4fQ50L41 855 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Fam133bQ9CVI2 245 aaKnown RBP11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Pard3Q99NH2 1333 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Arhgef40Q3UPH7 1517 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Lzts2Q91YU6 671 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Samd9lQ69Z37 1561 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 LdhaP06151 332 aaKnown RBP11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 HdxQ14B70 692 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Unc5clQ6R653 518 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 SympkQ80X82 1284 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Fsip1Q9D3V5 435 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Nfe2l3Q9WTM4 660 aa11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 Pacsin2Q9WVE8 486 aaKnown RBP11.21□□□□□ -0.61
Ubr1-201ENSMUST00000028728 MarsQ68FL6 902 aaKnown RBP11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Armcx3Q8BHS6 379 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ccz1Q8C1Y8 480 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Taf5lQ91WQ5 589 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Pcdha12Q91Y18 950 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ovgp1Q62010 721 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 AatkQ80YE4 1365 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ankk1Q8BZ25 745 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Telo2Q9DC40 840 aaKnown RBP11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Fhod3Q76LL6 1578 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Npc1l1Q6T3U4 1333 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Lcmt1A0A0U1RNF2 332 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Skor2A7M7C7 1008 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Gimap8Q75N62 688 aa11.21□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Ctnnd1P30999 938 aaKnown RBP11.2□□□□□ -0.62
Ubr1-201ENSMUST00000028728 Anks1aP59672 1150 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms