RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Irs4Q9Z0Y7 1216 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Stk39Q9Z1W9 556 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Nhsl1Q8CAF4 1587 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Qtrt2B8ZXI1 415 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Ube4aE9Q735 1028 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Slc7a3P70423 618 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Cyp7b1Q60991 507 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Rbm15bQ6PHZ5 887 aaKnown RBP18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Wasf1Q8R5H6 559 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Trim11Q99PQ2 467 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Clstn1Q9EPL2 979 aa18.73■□□□□ 0.59
Shh-201ENSMUST00000002708 Plch1Q4KWH5 1682 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Myh7bA2AQP0 1941 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Btn2a2A4QPC6 514 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Igsf3Q6ZQA6 1194 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Taf6lQ8R2K4 616 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Eif2ak3Q9Z2B5 1114 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Wnt7aP24383 349 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Sdc2P43407 202 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Ttll12Q3UDE2 639 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Tbx2Q60707 711 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Cd209bQ8CJ91 325 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Brd3Q8K2F0 726 aaKnown RBP18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 HdlbpQ8VDJ3 1268 aaKnown RBP18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Tc2nQ91XT6 489 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Bcl11bQ99PV8 884 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Ccdc39Q9D5Y1 937 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Lgr5Q9Z1P4 907 aa18.72■□□□□ 0.59
Shh-201ENSMUST00000002708 Prss40A6H6T1 365 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Izumo3A6PWV3 263 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Mapkapk5O54992 473 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Prl7d1P04769 244 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Nek1P51954 1203 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Ric8aQ3TIR3 530 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 PsdQ5DTT2 1024 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Rnf41Q8BH75 317 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Cep89Q9CZX2 791 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Atp1a2Q6PIE5 1020 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Olfr118Q7TRJ6 321 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Csrnp2Q8BGQ2 534 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Epc1Q8C9X6 813 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Ccdc150Q8CDI7 1110 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Rcan1Q9JHG6 198 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 GdaQ9R111 454 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Gja10Q9WUS4 505 aa18.71■□□□□ 0.59
Shh-201ENSMUST00000002708 Cyp2j7A0A140T8U1 504 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Tbc1d8bA3KGB4 1114 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Ampd3O08739 766 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Smarcc1P97496 1104 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Bap1Q99PU7 728 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Pet2A2AHY8 747 aa18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Ccdc12Q8R344 166 aaKnown RBP18.7■□□□□ 0.58
Shh-201ENSMUST00000002708 Anp32eP97822 260 aaKnown RBP18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Rtkn2Q14B46 604 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Fam89aQ14BJ1 175 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Krt40Q6IFX3 439 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Tpm4Q6IRU2 248 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Tbc1d5Q80XQ2 815 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Eno4Q8C042 619 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Sh3bp5lQ99LH9 392 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Gm3409A0A0G2JE67 319 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Ankrd63A2ARS0 390 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Zscan20B2KFW1 1030 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 LtbrP50284 415 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Sec23aQ01405 765 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Slc7a1Q09143 622 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 SfswapQ3USH5 945 aaKnown RBP18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Slc27a1Q60714 646 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Gimap8Q75N62 688 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Prdm4Q80V63 803 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Zswim4Q8C7B8 1101 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Rbm28Q8CGC6 750 aaKnown RBP18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Prr29B1ARI9 187 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Phldb3E9QAF4 648 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 TbcaP48428 108 aaKnown RBP18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Ppp1r21Q3TDD9 780 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Zc3h6Q8BYK8 1177 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Tspyl4Q8VD63 406 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Ubac1Q8VDI7 409 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Dbndd1Q9CZ00 160 aa18.69■□□□□ 0.58
Shh-201ENSMUST00000002708 Clec16aQ80U30 1036 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Cxcl11Q9JHH5 100 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Atp1a4Q9WV27 1032 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Foxo3Q9WVH4 672 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Sf3b2Q3UJB0 878 aaKnown RBP18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Hspa4Q61316 841 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Cyp4x1Q6A152 507 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Fez2Q6TYB5 348 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Olfr119Q7TRJ5 321 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Cfap69Q8BH53 942 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Tmem132aQ922P8 1018 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Iqca1Q9CUL5 857 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Vstm4T1NXB5 319 aa18.68■□□□□ 0.58
Shh-201ENSMUST00000002708 Myo3bQ1EG27 1305 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Tuft1O08970 390 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Celf1P28659 486 aaKnown RBP18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 A0A1Y7VML8 143 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Tbc1d2B1AVH7 922 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 Rsph10bE9PYQ0 876 aa18.67■□□□□ 0.58
Shh-201ENSMUST00000002708 PnnO35691 725 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms