RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Gm9508A0A1W2P7W0 230 aa3.88□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Krtap14O08640 167 aa3.87□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Cmya5Q70KF4 3739 aa3.87□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Prrc2cQ3TLH4 2846 aaKnown RBP3.87□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Gm21887J3QQ04 176 aa3.87□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Gm10382Q3V0T5 144 aa3.85□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Gm2310J3QNJ2 377 aa3.85□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Cox6b2Q80ZN9 88 aa3.85□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Adgrg4B7ZCC9 3073 aa3.84□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Col6a5A6H584 2640 aa3.84□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Ash1lQ99MY8 2958 aa3.84□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Muc2Q80Z19 2680 aa3.82□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Zzef1Q5SSH7 2924 aa3.82□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Pkd1l1Q8R526 2615 aa3.81□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Csmd2V9GX34 3611 aa3.8□□□□□ -1.8
Scn9a-203ENSMUST00000112354 DspE9Q557 2883 aaKnown RBP3.8□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Gm9507D3Z5T3 223 aa3.79□□□□□ -1.8
Scn9a-203ENSMUST00000112354 FlncQ8VHX6 2726 aaKnown RBP3.78□□□□□ -1.8
Scn9a-203ENSMUST00000112354 FcgbpE9Q0B5 2583 aa3.78□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Itpr2Q9Z329 2701 aa3.78□□□□□ -1.8
Scn9a-203ENSMUST00000112354 Hivep1Q03172 2688 aa3.77□□□□□ -1.81
Scn9a-203ENSMUST00000112354 Nbeal2Q6ZQA0 2742 aa3.76□□□□□ -1.81
Scn9a-203ENSMUST00000112354 Ndufaf8A2AMZ4 74 aa3.75□□□□□ -1.81
Scn9a-203ENSMUST00000112354 Muc4Q8JZM8 3443 aa3.73□□□□□ -1.81
Scn9a-203ENSMUST00000112354 Utp20Q5XG71 2788 aaKnown RBP3.73□□□□□ -1.81
Scn9a-203ENSMUST00000112354 Gm9112A2AI92 75 aa3.72□□□□□ -1.81
Scn9a-203ENSMUST00000112354 D6Ertd527eA0A0N4SWI3 464 aa3.71□□□□□ -1.82
Scn9a-203ENSMUST00000112354 Krtap10-4Q08EG8 221 aa3.68□□□□□ -1.82
Scn9a-203ENSMUST00000112354 Gm40193A0A1B0GT39 78 aa3.68□□□□□ -1.82
Scn9a-203ENSMUST00000112354 Tenm4Q3UHK6 2771 aa3.66□□□□□ -1.82
Scn9a-203ENSMUST00000112354 Tenm3Q9WTS6 2715 aa3.66□□□□□ -1.82
Scn9a-203ENSMUST00000112354 Igfn1Q3KNY0 2849 aa3.64□□□□□ -1.83
Scn9a-203ENSMUST00000112354 Krtap10-10A0A1W2P7T6 217 aa3.63□□□□□ -1.83
Scn9a-203ENSMUST00000112354 Tex15F8VPN2 2785 aa3.63□□□□□ -1.83
Scn9a-203ENSMUST00000112354 TgO08710 2766 aa3.63□□□□□ -1.83
Scn9a-203ENSMUST00000112354 LystP97412 3788 aa3.62□□□□□ -1.83
Scn9a-203ENSMUST00000112354 Tnp1P10856 55 aa3.61□□□□□ -1.83
Scn9a-203ENSMUST00000112354 Pdzd2E9Q1M1 2796 aa3.61□□□□□ -1.83
Scn9a-203ENSMUST00000112354 OtogO55225 2910 aa3.6□□□□□ -1.83
Scn9a-203ENSMUST00000112354 CubnQ9JLB4 3623 aa3.59□□□□□ -1.83
Scn9a-203ENSMUST00000112354 Celsr2Q9R0M0 2920 aa3.59□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Srrm2Q8BTI8 2703 aaKnown RBP3.58□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Gm2696A0A1W2P709 240 aa3.58□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Nf1Q04690 2841 aa3.57□□□□□ -1.84
Scn9a-203ENSMUST00000112354 A930033H14RikG5E8X6 103 aa3.56□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Gm5965D3Z724 196 aa3.56□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Col7a1Q63870 2944 aa3.55□□□□□ -1.84
Scn9a-203ENSMUST00000112354 LrbaQ9ESE1 2856 aa3.55□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Gm17416Q30KP4 66 aa3.54□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Ank2Q8C8R3 3898 aa3.53□□□□□ -1.84
Scn9a-203ENSMUST00000112354 Chd9Q8BYH8 2885 aa3.52□□□□□ -1.85
Scn9a-203ENSMUST00000112354 Xirp2Q4U4S6 3784 aa3.51□□□□□ -1.85
Scn9a-203ENSMUST00000112354 BsnO88737 3942 aa3.5□□□□□ -1.85
Scn9a-203ENSMUST00000112354 Prm2P07978 107 aa3.5□□□□□ -1.85
Scn9a-203ENSMUST00000112354 Hspg2Q05793 3707 aaKnown RBP3.48□□□□□ -1.85
Scn9a-203ENSMUST00000112354 ApcQ61315 2845 aa3.48□□□□□ -1.85
Scn9a-203ENSMUST00000112354 2310057N15RikQ9D6T8 200 aa3.45□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Gm20537G3UYK7 97 aa3.45□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Gm17402F6Z0L5 76 aa3.44□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Helz2E9QAM5 2947 aaKnown RBP3.44□□□□□ -1.86
Scn9a-203ENSMUST00000112354 2210017I01RikA0A0A6YVV1 95 aa3.43□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Tenm1Q9WTS4 2731 aa3.42□□□□□ -1.86
Scn9a-203ENSMUST00000112354 B930094E09RikQ8C4T2 136 aa3.42□□□□□ -1.86
Scn9a-203ENSMUST00000112354 2310079G19RikQ9D6L6 185 aa3.42□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Fbn1Q61554 2873 aaKnown RBP3.42□□□□□ -1.86
Scn9a-203ENSMUST00000112354 Tenm2Q9WTS5 2764 aa3.32□□□□□ -1.88
Scn9a-203ENSMUST00000112354 Megf8P60882 2789 aa3.32□□□□□ -1.88
Scn9a-203ENSMUST00000112354 Gm9918Q8BUR5 174 aa3.3□□□□□ -1.88
Scn9a-203ENSMUST00000112354 Dnah17Q69Z23 4481 aa3.28□□□□□ -1.89
Scn9a-203ENSMUST00000112354 4933428G20RikQ9D3X4 101 aa3.27□□□□□ -1.89
Scn9a-203ENSMUST00000112354 Gm11939A2A592 99 aa3.26□□□□□ -1.89
Scn9a-203ENSMUST00000112354 Gm9736A0A1W2P7N1 277 aa3.25□□□□□ -1.89
Scn9a-203ENSMUST00000112354 Krtap19-5O08632 62 aa3.24□□□□□ -1.89
Scn9a-203ENSMUST00000112354 Dnah14A0A140LIJ4 4489 aa3.21□□□□□ -1.9
Scn9a-203ENSMUST00000112354 VwfQ8CIZ8 2813 aa3.2□□□□□ -1.9
Scn9a-203ENSMUST00000112354 TnxbO35452 4006 aa3.19□□□□□ -1.9
Scn9a-203ENSMUST00000112354 Gm19668J3QMD1 248 aa3.18□□□□□ -1.9
Scn9a-203ENSMUST00000112354 Dnah3Q8BW94 4083 aa3.17□□□□□ -1.9
Scn9a-203ENSMUST00000112354 PlecQ9QXS1 4691 aaKnown RBP3.16□□□□□ -1.9
Scn9a-203ENSMUST00000112354 Krtap13-1Q8K198 168 aa3.16□□□□□ -1.9
Scn9a-203ENSMUST00000112354 Dnah10D3YYQ8 4591 aa3.16□□□□□ -1.9
Scn9a-203ENSMUST00000112354 Csmd3Q80T79 3707 aa3.15□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Krtap3-2Q9D638 99 aa3.13□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Krtap3-3Q9D7P0 99 aa3.13□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Muc6Q80T03 2850 aa3.12□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Kmt2aP55200 3966 aa3.12□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Dnah1E9Q8T7 4250 aa3.1□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Krtap3-1A2A591 98 aa3.1□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Dync2h1Q45VK7 4306 aa3.1□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Dnah6E9Q0B6 4144 aa3.1□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Huwe1Q7TMY8 4377 aaKnown RBP3.09□□□□□ -1.91
Scn9a-203ENSMUST00000112354 Dnah7bL7N1Y0 4068 aa3.06□□□□□ -1.92
Scn9a-203ENSMUST00000112354 Vps13dB1ART2 4390 aa3.06□□□□□ -1.92
Scn9a-203ENSMUST00000112354 Fras1Q80T14 4010 aa3.03□□□□□ -1.92
Scn9a-203ENSMUST00000112354 Dnah9B1AR51 4484 aa3.03□□□□□ -1.93
Scn9a-203ENSMUST00000112354 Dnah11E9Q7N9 4488 aa3.01□□□□□ -1.93
Scn9a-203ENSMUST00000112354 Dnah2P0C6F1 4456 aa3.01□□□□□ -1.93
Scn9a-203ENSMUST00000112354 Gm10318A0A1W2P728 225 aa3□□□□□ -1.93
Scn9a-203ENSMUST00000112354 Dync1h1Q9JHU4 4644 aaKnown RBP2.98□□□□□ -1.93
Scn9a-203ENSMUST00000112354 Krtap1-5A2A590 122 aa2.98□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms