RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Gm21887J3QQ04 176 aa6.28□□□□□ -1.4
Ciita-201ENSMUST00000023147 Gm9508A0A1W2P7W0 230 aa6.27□□□□□ -1.4
Ciita-201ENSMUST00000023147 Igfn1Q3KNY0 2849 aa6.26□□□□□ -1.41
Ciita-201ENSMUST00000023147 2310061N02RikQ9D6S9 174 aa6.23□□□□□ -1.41
Ciita-201ENSMUST00000023147 Krtap3-2Q9D638 99 aa6.23□□□□□ -1.41
Ciita-201ENSMUST00000023147 Krtap3-3Q9D7P0 99 aa6.23□□□□□ -1.41
Ciita-201ENSMUST00000023147 Hivep1Q03172 2688 aa6.22□□□□□ -1.41
Ciita-201ENSMUST00000023147 Tenm3Q9WTS6 2715 aa6.22□□□□□ -1.41
Ciita-201ENSMUST00000023147 Nbeal2Q6ZQA0 2742 aa6.21□□□□□ -1.42
Ciita-201ENSMUST00000023147 Akap9Q70FJ1 3797 aa6.21□□□□□ -1.42
Ciita-201ENSMUST00000023147 Ndufaf8A2AMZ4 74 aa6.19□□□□□ -1.42
Ciita-201ENSMUST00000023147 Nf1Q04690 2841 aa6.19□□□□□ -1.42
Ciita-201ENSMUST00000023147 Itpr2Q9Z329 2701 aa6.19□□□□□ -1.42
Ciita-201ENSMUST00000023147 Rps29P62274 56 aa6.19□□□□□ -1.42
Ciita-201ENSMUST00000023147 Gm884A2A9H6 3643 aa6.18□□□□□ -1.42
Ciita-201ENSMUST00000023147 FcgbpE9Q0B5 2583 aa6.18□□□□□ -1.42
Ciita-201ENSMUST00000023147 Zfhx4Q9JJN2 3550 aa6.17□□□□□ -1.42
Ciita-201ENSMUST00000023147 Krtap13O88375 197 aa6.16□□□□□ -1.42
Ciita-201ENSMUST00000023147 Chd9Q8BYH8 2885 aa6.15□□□□□ -1.42
Ciita-201ENSMUST00000023147 Csmd1Q923L3 3564 aa6.15□□□□□ -1.43
Ciita-201ENSMUST00000023147 Zfhx3Q61329 3726 aa6.15□□□□□ -1.43
Ciita-201ENSMUST00000023147 Celsr2Q9R0M0 2920 aa6.15□□□□□ -1.43
Ciita-201ENSMUST00000023147 Tenm4Q3UHK6 2771 aa6.14□□□□□ -1.43
Ciita-201ENSMUST00000023147 Gm9112A2AI92 75 aa6.13□□□□□ -1.43
Ciita-201ENSMUST00000023147 Tnp2P11378 117 aa6.13□□□□□ -1.43
Ciita-201ENSMUST00000023147 SpenQ62504 3644 aaKnown RBP6.12□□□□□ -1.43
Ciita-201ENSMUST00000023147 Tnp1P10856 55 aa6.11□□□□□ -1.43
Ciita-201ENSMUST00000023147 Tex15F8VPN2 2785 aa6.11□□□□□ -1.43
Ciita-201ENSMUST00000023147 Prm2P07978 107 aa6.11□□□□□ -1.43
Ciita-201ENSMUST00000023147 TgO08710 2766 aa6.1□□□□□ -1.43
Ciita-201ENSMUST00000023147 OtogO55225 2910 aa6.09□□□□□ -1.43
Ciita-201ENSMUST00000023147 Krtap14O08640 167 aa6.07□□□□□ -1.44
Ciita-201ENSMUST00000023147 Gm9507D3Z5T3 223 aa6.07□□□□□ -1.44
Ciita-201ENSMUST00000023147 ApcQ61315 2845 aa6.07□□□□□ -1.44
Ciita-201ENSMUST00000023147 Smg1Q8BKX6 3658 aaKnown RBP6.03□□□□□ -1.44
Ciita-201ENSMUST00000023147 Pdzd2E9Q1M1 2796 aa6.03□□□□□ -1.44
Ciita-201ENSMUST00000023147 Gm40193A0A1B0GT39 78 aa6.02□□□□□ -1.45
Ciita-201ENSMUST00000023147 LrbaQ9ESE1 2856 aa6.01□□□□□ -1.45
Ciita-201ENSMUST00000023147 D6Ertd527eA0A0N4SWI3 464 aa6□□□□□ -1.45
Ciita-201ENSMUST00000023147 Lama5Q61001 3718 aa5.97□□□□□ -1.45
Ciita-201ENSMUST00000023147 Helz2E9QAM5 2947 aaKnown RBP5.95□□□□□ -1.46
Ciita-201ENSMUST00000023147 Srrm2Q8BTI8 2703 aaKnown RBP5.92□□□□□ -1.46
Ciita-201ENSMUST00000023147 2210017I01RikA0A0A6YVV1 95 aa5.91□□□□□ -1.46
Ciita-201ENSMUST00000023147 Krtap10-4Q08EG8 221 aa5.9□□□□□ -1.47
Ciita-201ENSMUST00000023147 A930033H14RikG5E8X6 103 aa5.87□□□□□ -1.47
Ciita-201ENSMUST00000023147 2310079G19RikQ9D6L6 185 aa5.84□□□□□ -1.47
Ciita-201ENSMUST00000023147 Muc5acE9QAQ8 3455 aa5.81□□□□□ -1.48
Ciita-201ENSMUST00000023147 Krtap10-10A0A1W2P7T6 217 aa5.79□□□□□ -1.48
Ciita-201ENSMUST00000023147 Ank2Q8C8R3 3898 aa5.78□□□□□ -1.48
Ciita-201ENSMUST00000023147 Gm20537G3UYK7 97 aa5.77□□□□□ -1.49
Ciita-201ENSMUST00000023147 Megf8P60882 2789 aa5.77□□□□□ -1.49
Ciita-201ENSMUST00000023147 Gm5965D3Z724 196 aa5.72□□□□□ -1.49
Ciita-201ENSMUST00000023147 Gm2696A0A1W2P709 240 aa5.71□□□□□ -1.49
Ciita-201ENSMUST00000023147 Cmya5Q70KF4 3739 aa5.71□□□□□ -1.5
Ciita-201ENSMUST00000023147 2310057N15RikQ9D6T8 200 aa5.7□□□□□ -1.5
Ciita-201ENSMUST00000023147 Tenm1Q9WTS4 2731 aa5.7□□□□□ -1.5
Ciita-201ENSMUST00000023147 Svep1A2AVA0 3567 aa5.69□□□□□ -1.5
Ciita-201ENSMUST00000023147 Fbn1Q61554 2873 aaKnown RBP5.68□□□□□ -1.5
Ciita-201ENSMUST00000023147 B930094E09RikQ8C4T2 136 aa5.63□□□□□ -1.51
Ciita-201ENSMUST00000023147 Muc4Q8JZM8 3443 aa5.56□□□□□ -1.52
Ciita-201ENSMUST00000023147 Gm17416Q30KP4 66 aa5.49□□□□□ -1.53
Ciita-201ENSMUST00000023147 4933428G20RikQ9D3X4 101 aa5.47□□□□□ -1.53
Ciita-201ENSMUST00000023147 LystP97412 3788 aa5.44□□□□□ -1.54
Ciita-201ENSMUST00000023147 Gm17402F6Z0L5 76 aa5.44□□□□□ -1.54
Ciita-201ENSMUST00000023147 Col7a1Q63870 2944 aa5.43□□□□□ -1.54
Ciita-201ENSMUST00000023147 Gm9918Q8BUR5 174 aa5.42□□□□□ -1.54
Ciita-201ENSMUST00000023147 VwfQ8CIZ8 2813 aa5.4□□□□□ -1.55
Ciita-201ENSMUST00000023147 Tenm2Q9WTS5 2764 aa5.38□□□□□ -1.55
Ciita-201ENSMUST00000023147 Dnah17Q69Z23 4481 aa5.33□□□□□ -1.56
Ciita-201ENSMUST00000023147 Dnah14A0A140LIJ4 4489 aa5.33□□□□□ -1.56
Ciita-201ENSMUST00000023147 BsnO88737 3942 aa5.3□□□□□ -1.56
Ciita-201ENSMUST00000023147 Csmd2V9GX34 3611 aa5.3□□□□□ -1.56
Ciita-201ENSMUST00000023147 Xirp2Q4U4S6 3784 aa5.25□□□□□ -1.57
Ciita-201ENSMUST00000023147 Muc6Q80T03 2850 aa5.24□□□□□ -1.57
Ciita-201ENSMUST00000023147 Gm9736A0A1W2P7N1 277 aa5.21□□□□□ -1.58
Ciita-201ENSMUST00000023147 Gm19668J3QMD1 248 aa5.21□□□□□ -1.58
Ciita-201ENSMUST00000023147 Huwe1Q7TMY8 4377 aaKnown RBP5.19□□□□□ -1.58
Ciita-201ENSMUST00000023147 Krtap3-1A2A591 98 aa5.16□□□□□ -1.58
Ciita-201ENSMUST00000023147 Krtap19-5O08632 62 aa5.15□□□□□ -1.59
Ciita-201ENSMUST00000023147 Dnah3Q8BW94 4083 aa5.11□□□□□ -1.59
Ciita-201ENSMUST00000023147 CubnQ9JLB4 3623 aa5.1□□□□□ -1.59
Ciita-201ENSMUST00000023147 Krtap4-1Q3UUY3 169 aa5.08□□□□□ -1.6
Ciita-201ENSMUST00000023147 Dnah10D3YYQ8 4591 aa5.04□□□□□ -1.6
Ciita-201ENSMUST00000023147 PlecQ9QXS1 4691 aaKnown RBP5.04□□□□□ -1.6
Ciita-201ENSMUST00000023147 Kmt2aP55200 3966 aa5.03□□□□□ -1.6
Ciita-201ENSMUST00000023147 Vps13dB1ART2 4390 aa5.03□□□□□ -1.6
Ciita-201ENSMUST00000023147 Dnah11E9Q7N9 4488 aa5.03□□□□□ -1.6
Ciita-201ENSMUST00000023147 Dnah7bL7N1Y0 4068 aa5□□□□□ -1.61
Ciita-201ENSMUST00000023147 Krtap13-1Q8K198 168 aa5□□□□□ -1.61
Ciita-201ENSMUST00000023147 Dnah9B1AR51 4484 aa4.99□□□□□ -1.61
Ciita-201ENSMUST00000023147 Hspg2Q05793 3707 aaKnown RBP4.98□□□□□ -1.61
Ciita-201ENSMUST00000023147 Dync2h1Q45VK7 4306 aa4.98□□□□□ -1.61
Ciita-201ENSMUST00000023147 TnxbO35452 4006 aa4.98□□□□□ -1.61
Ciita-201ENSMUST00000023147 Dnah1E9Q8T7 4250 aa4.97□□□□□ -1.61
Ciita-201ENSMUST00000023147 Dnah5Q8VHE6 4621 aa4.96□□□□□ -1.62
Ciita-201ENSMUST00000023147 Dnah2P0C6F1 4456 aa4.94□□□□□ -1.62
Ciita-201ENSMUST00000023147 Stard9Q80TF6 4561 aa4.91□□□□□ -1.62
Ciita-201ENSMUST00000023147 Krtap7-1Q9D3I6 87 aa4.89□□□□□ -1.63
Ciita-201ENSMUST00000023147 Gm6358A0A087WPH4 74 aa4.87□□□□□ -1.63
Ciita-201ENSMUST00000023147 Gm10318A0A1W2P728 225 aa4.87□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms