RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Myo15bI7HPW8 3033 aa6.69□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 Tnp1P10856 55 aa6.68□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 Srrm2Q8BTI8 2703 aaKnown RBP6.68□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 Wdfy4E9Q2M9 3149 aa6.68□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 Rps29P62274 56 aa6.66□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 FcgbpE9Q0B5 2583 aa6.66□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 SpegQ62407 3262 aa6.65□□□□□ -1.34
Pcdhac1-201ENSMUST00000007584 Gm9507D3Z5T3 223 aa6.65□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Tnp2P11378 117 aa6.65□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 2310061N02RikQ9D6S9 174 aa6.65□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Krtap10-4Q08EG8 221 aa6.64□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 BptfA2A654 3036 aaKnown RBP6.62□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Celsr1O35161 3034 aa6.62□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Igfn1Q3KNY0 2849 aa6.61□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 2310057N15RikQ9D6T8 200 aa6.61□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Hivep1Q03172 2688 aa6.6□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Vps13cQ8BX70 3748 aa6.59□□□□□ -1.35
Pcdhac1-201ENSMUST00000007584 Krtap10-10A0A1W2P7T6 217 aa6.55□□□□□ -1.36
Pcdhac1-201ENSMUST00000007584 Itpr2Q9Z329 2701 aa6.53□□□□□ -1.36
Pcdhac1-201ENSMUST00000007584 Dmxl2Q8BPN8 3032 aa6.51□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 Muc2Q80Z19 2680 aa6.51□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 RelnQ60841 3461 aa6.51□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 B930094E09RikQ8C4T2 136 aa6.48□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 Gm884A2A9H6 3643 aa6.48□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 SpenQ62504 3644 aaKnown RBP6.47□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 LrbaQ9ESE1 2856 aa6.46□□□□□ -1.37
Pcdhac1-201ENSMUST00000007584 Akap9Q70FJ1 3797 aa6.46□□□□□ -1.38
Pcdhac1-201ENSMUST00000007584 Zzef1Q5SSH7 2924 aa6.42□□□□□ -1.38
Pcdhac1-201ENSMUST00000007584 Muc5acE9QAQ8 3455 aa6.42□□□□□ -1.38
Pcdhac1-201ENSMUST00000007584 2310079G19RikQ9D6L6 185 aa6.41□□□□□ -1.38
Pcdhac1-201ENSMUST00000007584 Celsr2Q9R0M0 2920 aa6.39□□□□□ -1.39
Pcdhac1-201ENSMUST00000007584 Csmd1Q923L3 3564 aa6.36□□□□□ -1.39
Pcdhac1-201ENSMUST00000007584 A930033H14RikG5E8X6 103 aa6.36□□□□□ -1.39
Pcdhac1-201ENSMUST00000007584 Zfhx4Q9JJN2 3550 aa6.34□□□□□ -1.39
Pcdhac1-201ENSMUST00000007584 Adgrg4B7ZCC9 3073 aa6.33□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 Zfhx3Q61329 3726 aa6.32□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 NbeaQ9EPN1 2936 aa6.31□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 Trank1Q8BV79 2999 aa6.31□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 Gm2696A0A1W2P709 240 aa6.31□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 Smg1Q8BKX6 3658 aaKnown RBP6.3□□□□□ -1.4
Pcdhac1-201ENSMUST00000007584 Pdzd2E9Q1M1 2796 aa6.27□□□□□ -1.41
Pcdhac1-201ENSMUST00000007584 Chd9Q8BYH8 2885 aa6.27□□□□□ -1.41
Pcdhac1-201ENSMUST00000007584 Helz2E9QAM5 2947 aaKnown RBP6.23□□□□□ -1.41
Pcdhac1-201ENSMUST00000007584 FlncQ8VHX6 2726 aaKnown RBP6.21□□□□□ -1.41
Pcdhac1-201ENSMUST00000007584 Lama5Q61001 3718 aa6.2□□□□□ -1.42
Pcdhac1-201ENSMUST00000007584 Nf1Q04690 2841 aa6.18□□□□□ -1.42
Pcdhac1-201ENSMUST00000007584 Megf8P60882 2789 aa6.13□□□□□ -1.43
Pcdhac1-201ENSMUST00000007584 Tenm1Q9WTS4 2731 aa6.12□□□□□ -1.43
Pcdhac1-201ENSMUST00000007584 Svep1A2AVA0 3567 aa6.08□□□□□ -1.44
Pcdhac1-201ENSMUST00000007584 Tenm3Q9WTS6 2715 aa6.08□□□□□ -1.44
Pcdhac1-201ENSMUST00000007584 Gm17416Q30KP4 66 aa6.04□□□□□ -1.44
Pcdhac1-201ENSMUST00000007584 Gm17402F6Z0L5 76 aa6.02□□□□□ -1.45
Pcdhac1-201ENSMUST00000007584 Cmya5Q70KF4 3739 aa5.99□□□□□ -1.45
Pcdhac1-201ENSMUST00000007584 2210017I01RikA0A0A6YVV1 95 aa5.99□□□□□ -1.45
Pcdhac1-201ENSMUST00000007584 Gm9918Q8BUR5 174 aa5.93□□□□□ -1.46
Pcdhac1-201ENSMUST00000007584 4933428G20RikQ9D3X4 101 aa5.92□□□□□ -1.46
Pcdhac1-201ENSMUST00000007584 OtogO55225 2910 aa5.9□□□□□ -1.46
Pcdhac1-201ENSMUST00000007584 Muc4Q8JZM8 3443 aa5.89□□□□□ -1.47
Pcdhac1-201ENSMUST00000007584 Tenm4Q3UHK6 2771 aa5.85□□□□□ -1.47
Pcdhac1-201ENSMUST00000007584 Gm9736A0A1W2P7N1 277 aa5.83□□□□□ -1.48
Pcdhac1-201ENSMUST00000007584 Tenm2Q9WTS5 2764 aa5.81□□□□□ -1.48
Pcdhac1-201ENSMUST00000007584 Gm19668J3QMD1 248 aa5.81□□□□□ -1.48
Pcdhac1-201ENSMUST00000007584 VwfQ8CIZ8 2813 aa5.75□□□□□ -1.49
Pcdhac1-201ENSMUST00000007584 Ank2Q8C8R3 3898 aa5.73□□□□□ -1.49
Pcdhac1-201ENSMUST00000007584 Krtap13-1Q8K198 168 aa5.73□□□□□ -1.49
Pcdhac1-201ENSMUST00000007584 Gm11939A2A592 99 aa5.72□□□□□ -1.49
Pcdhac1-201ENSMUST00000007584 Gm10318A0A1W2P728 225 aa5.66□□□□□ -1.5
Pcdhac1-201ENSMUST00000007584 Krtap3-2Q9D638 99 aa5.65□□□□□ -1.5
Pcdhac1-201ENSMUST00000007584 Krtap3-3Q9D7P0 99 aa5.65□□□□□ -1.5
Pcdhac1-201ENSMUST00000007584 LystP97412 3788 aa5.65□□□□□ -1.51
Pcdhac1-201ENSMUST00000007584 Csmd2V9GX34 3611 aa5.63□□□□□ -1.51
Pcdhac1-201ENSMUST00000007584 Krtap3-1A2A591 98 aa5.63□□□□□ -1.51
Pcdhac1-201ENSMUST00000007584 Fbn1Q61554 2873 aaKnown RBP5.56□□□□□ -1.52
Pcdhac1-201ENSMUST00000007584 Krtap7-1Q9D3I6 87 aa5.52□□□□□ -1.53
Pcdhac1-201ENSMUST00000007584 BsnO88737 3942 aa5.49□□□□□ -1.53
Pcdhac1-201ENSMUST00000007584 CubnQ9JLB4 3623 aa5.47□□□□□ -1.53
Pcdhac1-201ENSMUST00000007584 Col7a1Q63870 2944 aa5.47□□□□□ -1.53
Pcdhac1-201ENSMUST00000007584 Xirp2Q4U4S6 3784 aa5.47□□□□□ -1.53
Pcdhac1-201ENSMUST00000007584 Crct1Q6PAI5 102 aa5.42□□□□□ -1.54
Pcdhac1-201ENSMUST00000007584 Krtap19-5O08632 62 aa5.3□□□□□ -1.56
Pcdhac1-201ENSMUST00000007584 Hspg2Q05793 3707 aaKnown RBP5.28□□□□□ -1.56
Pcdhac1-201ENSMUST00000007584 Gm6358A0A087WPH4 74 aa5.26□□□□□ -1.57
Pcdhac1-201ENSMUST00000007584 Dnah14A0A140LIJ4 4489 aa5.25□□□□□ -1.57
Pcdhac1-201ENSMUST00000007584 Sprr2a3Q4KL71 83 aa5.23□□□□□ -1.57
Pcdhac1-201ENSMUST00000007584 Sprr2a1Q9CQK8 83 aa5.23□□□□□ -1.57
Pcdhac1-201ENSMUST00000007584 Huwe1Q7TMY8 4377 aaKnown RBP5.14□□□□□ -1.59
Pcdhac1-201ENSMUST00000007584 Dnah17Q69Z23 4481 aa5.12□□□□□ -1.59
Pcdhac1-201ENSMUST00000007584 Kmt2aP55200 3966 aa5.08□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Gm19402J3QJV4 266 aa5.08□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Dnah3Q8BW94 4083 aa5.07□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Krtap1-5A2A590 122 aa5.05□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Dnah7bL7N1Y0 4068 aa5.03□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Dnah6E9Q0B6 4144 aa5.03□□□□□ -1.6
Pcdhac1-201ENSMUST00000007584 Dnah10D3YYQ8 4591 aa5□□□□□ -1.61
Pcdhac1-201ENSMUST00000007584 Krtap19-9aF8WH65 55 aa4.98□□□□□ -1.61
Pcdhac1-201ENSMUST00000007584 Krtap19-9bQ99NG9 58 aa4.98□□□□□ -1.61
Pcdhac1-201ENSMUST00000007584 Krtap12-1Q9Z287 130 aa4.97□□□□□ -1.61
Pcdhac1-201ENSMUST00000007584 Muc6Q80T03 2850 aa4.97□□□□□ -1.61
Pcdhac1-201ENSMUST00000007584 Dnah1E9Q8T7 4250 aa4.95□□□□□ -1.62
Pcdhac1-201ENSMUST00000007584 Dnah11E9Q7N9 4488 aa4.95□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms