RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Dnah1E9Q8T7 4250 aa13.59□□□□□ -0.23
Trim9-208ENSMUST00000221370 Mrpl55Q9CZ83 127 aa13.59□□□□□ -0.23
Trim9-208ENSMUST00000221370 Defb40Q70KL2 73 aa13.58□□□□□ -0.24
Trim9-208ENSMUST00000221370 Stab1Q8R4Y4 2571 aa13.56□□□□□ -0.24
Trim9-208ENSMUST00000221370 Srrm2Q8BTI8 2703 aaKnown RBP13.56□□□□□ -0.24
Trim9-208ENSMUST00000221370 Sslp1Q3UN54 99 aa13.55□□□□□ -0.24
Trim9-208ENSMUST00000221370 Dnah17Q69Z23 4481 aa13.53□□□□□ -0.24
Trim9-208ENSMUST00000221370 1700018G05RikA0A1B0GSI2 66 aa13.53□□□□□ -0.24
Trim9-208ENSMUST00000221370 Spint4Q9D263 159 aa13.52□□□□□ -0.25
Trim9-208ENSMUST00000221370 B9d2Q3UK10 175 aa13.51□□□□□ -0.25
Trim9-208ENSMUST00000221370 Dnah7bL7N1Y0 4068 aa13.5□□□□□ -0.25
Trim9-208ENSMUST00000221370 Igkv3-10A0A0G2JGN0 119 aa13.5□□□□□ -0.25
Trim9-208ENSMUST00000221370 Gm21886J3QJU9 214 aa13.5□□□□□ -0.25
Trim9-208ENSMUST00000221370 Col6a5A6H584 2640 aa13.49□□□□□ -0.25
Trim9-208ENSMUST00000221370 H2al1bA0A087WP11 105 aa13.48□□□□□ -0.25
Trim9-208ENSMUST00000221370 H2al1kJ3QP08 105 aa13.48□□□□□ -0.25
Trim9-208ENSMUST00000221370 H2al1eQ810S6 105 aa13.48□□□□□ -0.25
Trim9-208ENSMUST00000221370 Cdc42se1Q8BHL7 80 aa13.48□□□□□ -0.25
Trim9-208ENSMUST00000221370 H2al1mQ9DAD9 105 aa13.48□□□□□ -0.25
Trim9-208ENSMUST00000221370 AW011738F6S7Q2 159 aa13.47□□□□□ -0.25
Trim9-208ENSMUST00000221370 Chchd10Q7TNL9 138 aa13.46□□□□□ -0.25
Trim9-208ENSMUST00000221370 Dnah14A0A140LIJ4 4489 aa13.46□□□□□ -0.25
Trim9-208ENSMUST00000221370 FlnbQ80X90 2602 aaKnown RBP13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Dnah10D3YYQ8 4591 aa13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Gm36176A0A1W2P8D5 158 aa13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Defa28D3Z1V9 94 aa13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Gm10139O88245 57 aa13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Zcchc13Q9D548 170 aa13.45□□□□□ -0.26
Trim9-208ENSMUST00000221370 Hivep1Q03172 2688 aa13.44□□□□□ -0.26
Trim9-208ENSMUST00000221370 Odf3bQ5M8M2 238 aa13.43□□□□□ -0.26
Trim9-208ENSMUST00000221370 Atox1O08997 68 aaKnown RBP13.42□□□□□ -0.26
Trim9-208ENSMUST00000221370 SycnQ8VCK7 134 aa13.41□□□□□ -0.26
Trim9-208ENSMUST00000221370 Fn1P11276 2477 aaKnown RBP13.4□□□□□ -0.26
Trim9-208ENSMUST00000221370 Dnah6E9Q0B6 4144 aa13.38□□□□□ -0.27
Trim9-208ENSMUST00000221370 Gm28230A0A0A0MQ91 144 aa13.38□□□□□ -0.27
Trim9-208ENSMUST00000221370 A0A286YE49 62 aa13.37□□□□□ -0.27
Trim9-208ENSMUST00000221370 Wfdc17Q5SSJ1 76 aa13.37□□□□□ -0.27
Trim9-208ENSMUST00000221370 Reg3aO09037 175 aa13.37□□□□□ -0.27
Trim9-208ENSMUST00000221370 2310061N02RikQ9D6S9 174 aa13.36□□□□□ -0.27
Trim9-208ENSMUST00000221370 AI606181Q8C7B9 129 aa13.36□□□□□ -0.27
Trim9-208ENSMUST00000221370 Gm20604F8WIA3 75 aa13.35□□□□□ -0.27
Trim9-208ENSMUST00000221370 Wfdc13Q5DQQ6 81 aa13.35□□□□□ -0.27
Trim9-208ENSMUST00000221370 Coa5Q99M07 74 aa13.35□□□□□ -0.27
Trim9-208ENSMUST00000221370 Nsd1O88491 2588 aaKnown RBP13.35□□□□□ -0.27
Trim9-208ENSMUST00000221370 Gm7137J3QMW1 236 aa13.34□□□□□ -0.27
Trim9-208ENSMUST00000221370 Wfdc10Q3V2J9 124 aa13.33□□□□□ -0.28
Trim9-208ENSMUST00000221370 TgO08710 2766 aa13.32□□□□□ -0.28
Trim9-208ENSMUST00000221370 Ube2aQ9Z255 152 aa13.32□□□□□ -0.28
Trim9-208ENSMUST00000221370 Gm10197F6QEY5 67 aa13.31□□□□□ -0.28
Trim9-208ENSMUST00000221370 Defb12Q8K4N3 78 aa13.31□□□□□ -0.28
Trim9-208ENSMUST00000221370 Gm10837Q3UTT8 145 aa13.28□□□□□ -0.28
Trim9-208ENSMUST00000221370 VwfQ8CIZ8 2813 aa13.26□□□□□ -0.29
Trim9-208ENSMUST00000221370 Phf5aP83870 110 aaKnown RBP13.25□□□□□ -0.29
Trim9-208ENSMUST00000221370 1700074P13RikQ9D9G7 251 aa13.24□□□□□ -0.29
Trim9-208ENSMUST00000221370 Igkv3-7A0A0G2JE31 119 aa13.23□□□□□ -0.29
Trim9-208ENSMUST00000221370 9530053A07RikE9PVG8 2581 aa13.22□□□□□ -0.29
Trim9-208ENSMUST00000221370 Gm2310J3QNJ2 377 aa13.22□□□□□ -0.29
Trim9-208ENSMUST00000221370 Rpl37aP61514 92 aa13.22□□□□□ -0.29
Trim9-208ENSMUST00000221370 Bean1Q9EQG5 255 aa13.22□□□□□ -0.29
Trim9-208ENSMUST00000221370 Csmd3Q80T79 3707 aa13.2□□□□□ -0.3
Trim9-208ENSMUST00000221370 Spata3Q9D9T6 193 aa13.2□□□□□ -0.3
Trim9-208ENSMUST00000221370 Q8K1L6 76 aa13.19□□□□□ -0.3
Trim9-208ENSMUST00000221370 Dync2h1Q45VK7 4306 aa13.16□□□□□ -0.3
Trim9-208ENSMUST00000221370 Gm27235Q3UW50 83 aa13.13□□□□□ -0.31
Trim9-208ENSMUST00000221370 Igkv3-5A0A140T8M6 119 aa13.12□□□□□ -0.31
Trim9-208ENSMUST00000221370 Defb9Q8R2I6 67 aa13.11□□□□□ -0.31
Trim9-208ENSMUST00000221370 Dnah11E9Q7N9 4488 aa13.1□□□□□ -0.31
Trim9-208ENSMUST00000221370 6030445D17RikE9Q8F9 148 aa13.09□□□□□ -0.31
Trim9-208ENSMUST00000221370 Defb10Q8R2I8 73 aa13.08□□□□□ -0.32
Trim9-208ENSMUST00000221370 1700012A03RikQ9DAF1 130 aa13.08□□□□□ -0.32
Trim9-208ENSMUST00000221370 Chtf8P0CG14 533 aa13.07□□□□□ -0.32
Trim9-208ENSMUST00000221370 Phxr4P15974 95 aa13.07□□□□□ -0.32
Trim9-208ENSMUST00000221370 Nupr2Q497P3 102 aa13.07□□□□□ -0.32
Trim9-208ENSMUST00000221370 Sox16Q62247 57 aa13.07□□□□□ -0.32
Trim9-208ENSMUST00000221370 HrnrQ8VHD8 2496 aa13.05□□□□□ -0.32
Trim9-208ENSMUST00000221370 Gm10065F6TJM2 114 aa13.03□□□□□ -0.32
Trim9-208ENSMUST00000221370 Dnah9B1AR51 4484 aa13.02□□□□□ -0.32
Trim9-208ENSMUST00000221370 Gm9508A0A1W2P7W0 230 aa13.02□□□□□ -0.33
Trim9-208ENSMUST00000221370 Tenm2Q9WTS5 2764 aa13□□□□□ -0.33
Trim9-208ENSMUST00000221370 Gm10267M0QWD8 85 aa12.97□□□□□ -0.33
Trim9-208ENSMUST00000221370 4933415A04RikQ9D443 101 aa12.97□□□□□ -0.33
Trim9-208ENSMUST00000221370 Huwe1Q7TMY8 4377 aaKnown RBP12.97□□□□□ -0.33
Trim9-208ENSMUST00000221370 Gm10642Q3TWM1 71 aa12.95□□□□□ -0.34
Trim9-208ENSMUST00000221370 Megf8P60882 2789 aa12.94□□□□□ -0.34
Trim9-208ENSMUST00000221370 Krtap29-1A2A5X4 342 aa12.94□□□□□ -0.34
Trim9-208ENSMUST00000221370 Gm10160F6Y577 67 aa12.93□□□□□ -0.34
Trim9-208ENSMUST00000221370 Stab2Q8R4U0 2559 aa12.91□□□□□ -0.34
Trim9-208ENSMUST00000221370 Muc6Q80T03 2850 aa12.9□□□□□ -0.34
Trim9-208ENSMUST00000221370 Igkv3-3A0A140T8Q0 119 aa12.9□□□□□ -0.34
Trim9-208ENSMUST00000221370 TnxbO35452 4006 aa12.88□□□□□ -0.35
Trim9-208ENSMUST00000221370 Gm17349F7BGH6 99 aa12.88□□□□□ -0.35
Trim9-208ENSMUST00000221370 Znf706Q9D115 76 aaKnown RBP12.88□□□□□ -0.35
Trim9-208ENSMUST00000221370 Gm28374F6SG70 93 aa12.87□□□□□ -0.35
Trim9-208ENSMUST00000221370 Gm4707V9GXN5 68 aa12.87□□□□□ -0.35
Trim9-208ENSMUST00000221370 Igsf10Q3V1M1 2594 aa12.87□□□□□ -0.35
Trim9-208ENSMUST00000221370 Cypt14J3QPF7 87 aa12.86□□□□□ -0.35
Trim9-208ENSMUST00000221370 FasnP19096 2504 aaKnown RBP12.85□□□□□ -0.35
Trim9-208ENSMUST00000221370 Plac8Q9JI48 112 aa12.85□□□□□ -0.35
Trim9-208ENSMUST00000221370 Gm16253D3Z167 63 aa12.82□□□□□ -0.36
Trim9-208ENSMUST00000221370 Fras1Q80T14 4010 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 830.4 ms