RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Ighv8-11A0A075B5X4 119 aa13.3□□□□□ -0.28
Sort1-203ENSMUST00000135636 Gm10642Q3TWM1 71 aa13.3□□□□□ -0.28
Sort1-203ENSMUST00000135636 AcanQ61282 2132 aaKnown RBP13.3□□□□□ -0.28
Sort1-203ENSMUST00000135636 NbasE9Q411 2356 aa13.3□□□□□ -0.28
Sort1-203ENSMUST00000135636 Pla2g2eQ9QUL3 142 aa13.29□□□□□ -0.28
Sort1-203ENSMUST00000135636 Gvin1Q80SU7 2427 aa13.29□□□□□ -0.28
Sort1-203ENSMUST00000135636 Cox7cP17665 63 aa13.29□□□□□ -0.28
Sort1-203ENSMUST00000135636 Znf239P24399 201 aa13.29□□□□□ -0.28
Sort1-203ENSMUST00000135636 Col4a2P08122 1707 aa13.29□□□□□ -0.28
Sort1-203ENSMUST00000135636 Ighv8-13A0A075B5Y0 101 aa13.28□□□□□ -0.28
Sort1-203ENSMUST00000135636 4930556J24RikQ9D4U7 146 aa13.28□□□□□ -0.28
Sort1-203ENSMUST00000135636 SrcapA0A087WQ44 3271 aa13.27□□□□□ -0.28
Sort1-203ENSMUST00000135636 Tmem254aP0DN89 123 aa13.27□□□□□ -0.29
Sort1-203ENSMUST00000135636 Tmem254bP0DN90 123 aa13.27□□□□□ -0.29
Sort1-203ENSMUST00000135636 Tmem254cP0DN91 123 aa13.27□□□□□ -0.29
Sort1-203ENSMUST00000135636 Ramp1Q9WTJ5 148 aa13.27□□□□□ -0.29
Sort1-203ENSMUST00000135636 A830031A19RikQ8BNT5 113 aa13.27□□□□□ -0.29
Sort1-203ENSMUST00000135636 Q9DAQ5 155 aa13.26□□□□□ -0.29
Sort1-203ENSMUST00000135636 Fgfbp3Q1HCM0 245 aa13.26□□□□□ -0.29
Sort1-203ENSMUST00000135636 Gm26602M0QWA4 95 aa13.25□□□□□ -0.29
Sort1-203ENSMUST00000135636 Dido1Q8C9B9 2256 aaKnown RBP13.25□□□□□ -0.29
Sort1-203ENSMUST00000135636 Pde6gP09174 87 aa13.25□□□□□ -0.29
Sort1-203ENSMUST00000135636 B230217C12RikE9Q3Z1 139 aa13.24□□□□□ -0.29
Sort1-203ENSMUST00000135636 Fam240bJ3QMB3 78 aa13.24□□□□□ -0.29
Sort1-203ENSMUST00000135636 4930519P11RikQ9CUJ8 166 aa13.24□□□□□ -0.29
Sort1-203ENSMUST00000135636 9230102O04RikA2ASX7 82 aa13.24□□□□□ -0.29
Sort1-203ENSMUST00000135636 A0A286YE49 62 aa13.23□□□□□ -0.29
Sort1-203ENSMUST00000135636 1700011M02RikB1AX35 88 aa13.22□□□□□ -0.29
Sort1-203ENSMUST00000135636 Gm5464Q3UY29 175 aa13.22□□□□□ -0.29
Sort1-203ENSMUST00000135636 Cdc42se2Q8BGH7 84 aa13.22□□□□□ -0.29
Sort1-203ENSMUST00000135636 Trav14-1A0A0G2JF94 121 aa13.2□□□□□ -0.3
Sort1-203ENSMUST00000135636 Vpreb1P13372 142 aa13.2□□□□□ -0.3
Sort1-203ENSMUST00000135636 Ighv2-9-1A0A075B697 116 aa13.2□□□□□ -0.3
Sort1-203ENSMUST00000135636 CtrlQ9ER05 264 aa13.19□□□□□ -0.3
Sort1-203ENSMUST00000135636 Brwd1Q921C3 2304 aa13.19□□□□□ -0.3
Sort1-203ENSMUST00000135636 Gm10509O88255 85 aa13.19□□□□□ -0.3
Sort1-203ENSMUST00000135636 Ifitm6A0A1B0GS75 124 aa13.19□□□□□ -0.3
Sort1-203ENSMUST00000135636 Gm26566Q8CAC1 153 aa13.18□□□□□ -0.3
Sort1-203ENSMUST00000135636 AcacbE9Q4Z2 2448 aa13.18□□□□□ -0.3
Sort1-203ENSMUST00000135636 PtprbB2RU80 1998 aa13.18□□□□□ -0.3
Sort1-203ENSMUST00000135636 CdsnQ7TPC1 561 aa13.17□□□□□ -0.3
Sort1-203ENSMUST00000135636 SrarpQ3ULG3 163 aa13.17□□□□□ -0.3
Sort1-203ENSMUST00000135636 Gm1968Q3T9I3 115 aa13.17□□□□□ -0.3
Sort1-203ENSMUST00000135636 Notch3Q61982 2318 aa13.17□□□□□ -0.3
Sort1-203ENSMUST00000135636 Gm17509Q9CZ61 145 aa13.16□□□□□ -0.3
Sort1-203ENSMUST00000135636 Atox1O08997 68 aaKnown RBP13.16□□□□□ -0.3
Sort1-203ENSMUST00000135636 Lrp4Q8VI56 1905 aa13.15□□□□□ -0.3
Sort1-203ENSMUST00000135636 H2al1kJ3QP08 105 aa13.15□□□□□ -0.3
Sort1-203ENSMUST00000135636 Gm9903Q8C9Y8 129 aa13.15□□□□□ -0.3
Sort1-203ENSMUST00000135636 Pkd1l2Q7TN88 2461 aa13.15□□□□□ -0.3
Sort1-203ENSMUST00000135636 NpwA0A1L1STR8 176 aa13.15□□□□□ -0.3
Sort1-203ENSMUST00000135636 Arhgap32Q811P8 2089 aa13.14□□□□□ -0.31
Sort1-203ENSMUST00000135636 Cd27P41272 250 aa13.14□□□□□ -0.31
Sort1-203ENSMUST00000135636 Serp2Q6TAW2 65 aa13.13□□□□□ -0.31
Sort1-203ENSMUST00000135636 P0C913 63 aa13.12□□□□□ -0.31
Sort1-203ENSMUST00000135636 Tax1bp3Q9DBG9 124 aa13.11□□□□□ -0.31
Sort1-203ENSMUST00000135636 Myo9aQ8C170 2542 aa13.11□□□□□ -0.31
Sort1-203ENSMUST00000135636 Gm20604F8WIA3 75 aa13.1□□□□□ -0.31
Sort1-203ENSMUST00000135636 Prr9Q8BV84 116 aa13.1□□□□□ -0.31
Sort1-203ENSMUST00000135636 Gm17606F6ZL36 78 aa13.1□□□□□ -0.31
Sort1-203ENSMUST00000135636 A730009L09RikA0A1B0GS82 72 aa13.09□□□□□ -0.31
Sort1-203ENSMUST00000135636 Gm6899Q3USS0 134 aa13.09□□□□□ -0.31
Sort1-203ENSMUST00000135636 Wdr38Q9D994 303 aa13.09□□□□□ -0.31
Sort1-203ENSMUST00000135636 AI606181Q8C7B9 129 aa13.08□□□□□ -0.32
Sort1-203ENSMUST00000135636 Abca2P41234 2434 aa13.07□□□□□ -0.32
Sort1-203ENSMUST00000135636 Col27a1Q5QNQ9 1845 aa13.07□□□□□ -0.32
Sort1-203ENSMUST00000135636 Prol1E9PYQ4 312 aa13.07□□□□□ -0.32
Sort1-203ENSMUST00000135636 Gm3233E9Q2H5 230 aa13.07□□□□□ -0.32
Sort1-203ENSMUST00000135636 Ntn5Q3UQ22 452 aa13.06□□□□□ -0.32
Sort1-203ENSMUST00000135636 Spata3Q9D9T6 193 aa13.04□□□□□ -0.32
Sort1-203ENSMUST00000135636 Krtap24-1G3X9A2 248 aa13.04□□□□□ -0.32
Sort1-203ENSMUST00000135636 Phf5aP83870 110 aaKnown RBP13.03□□□□□ -0.32
Sort1-203ENSMUST00000135636 Defb45Q3V490 66 aa13.03□□□□□ -0.32
Sort1-203ENSMUST00000135636 Gm10322F7D7I4 111 aa13.03□□□□□ -0.32
Sort1-203ENSMUST00000135636 Gm5468Q8C3D3 155 aa13.03□□□□□ -0.32
Sort1-203ENSMUST00000135636 Tmem213Q08EA8 116 aa13.02□□□□□ -0.32
Sort1-203ENSMUST00000135636 Gm28230A0A0A0MQ91 144 aa13.02□□□□□ -0.33
Sort1-203ENSMUST00000135636 P01819 144 aa13.01□□□□□ -0.33
Sort1-203ENSMUST00000135636 Zfand2aQ9JII7 171 aa13.01□□□□□ -0.33
Sort1-203ENSMUST00000135636 Spaca4Q80ZQ0 127 aa13.01□□□□□ -0.33
Sort1-203ENSMUST00000135636 Q9DAA7 145 aa13.01□□□□□ -0.33
Sort1-203ENSMUST00000135636 Hivep2Q3UHF7 2430 aa13.01□□□□□ -0.33
Sort1-203ENSMUST00000135636 Defb37Q7TMD2 62 aa13□□□□□ -0.33
Sort1-203ENSMUST00000135636 Ighv2-5A0A0A6YY69 116 aa13□□□□□ -0.33
Sort1-203ENSMUST00000135636 Gpr15lA0A0B4J1N3 78 aa12.99□□□□□ -0.33
Sort1-203ENSMUST00000135636 Gm5617Q91VN2 117 aa12.99□□□□□ -0.33
Sort1-203ENSMUST00000135636 Gm5142Q8C5X9 133 aa12.98□□□□□ -0.33
Sort1-203ENSMUST00000135636 Polr2kQ63871 58 aa12.98□□□□□ -0.33
Sort1-203ENSMUST00000135636 Ndufc1Q9CQY9 76 aa12.97□□□□□ -0.33
Sort1-203ENSMUST00000135636 Timm17bQ9Z0V7 172 aa12.96□□□□□ -0.34
Sort1-203ENSMUST00000135636 Defb1P56386 69 aa12.95□□□□□ -0.34
Sort1-203ENSMUST00000135636 Q9DAB9 146 aa12.95□□□□□ -0.34
Sort1-203ENSMUST00000135636 Rpl37aP61514 92 aa12.94□□□□□ -0.34
Sort1-203ENSMUST00000135636 Gm10570F6VB42 170 aa12.94□□□□□ -0.34
Sort1-203ENSMUST00000135636 PpdpfQ9CR37 115 aa12.93□□□□□ -0.34
Sort1-203ENSMUST00000135636 Defb50Q6TU36 73 aa12.93□□□□□ -0.34
Sort1-203ENSMUST00000135636 Cd164Q9R0L9 197 aa12.93□□□□□ -0.34
Sort1-203ENSMUST00000135636 Gm5153P01627 120 aa12.93□□□□□ -0.34
Sort1-203ENSMUST00000135636 Odf3l2Q3TZ65 277 aa12.92□□□□□ -0.34
Sort1-203ENSMUST00000135636 1700018G05RikA0A1B0GSI2 66 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms