RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Gm8439G3UWA7 96 aa8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 P01755 137 aa8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Rnf138Q9CQE0 245 aaKnown RBP8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 SnurfQ9WU12 71 aa8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Gm21748Q3UE70 102 aa8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Tcl1b5P56845 121 aa8.35□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Cyyr1Q8VIH7 165 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Col5a3Q9JLI2 1739 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 4930564D02RikQ9D4S4 103 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 PscaP57096 123 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Spry4Q9WTP2 300 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Nup210Q9QY81 1886 aaKnown RBP8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Spg11Q3UHA3 2430 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 5730596B20RikQ8BQ08 205 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Ighv1-85A0A075B5Y6 117 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Igkv3-7A0A0G2JE31 119 aa8.34□□□□□ -1.07
Gtf3c1-201ENSMUST00000055506 Crip2Q9DCT8 208 aaKnown RBP8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Thsd7bQ6P4U0 1607 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 P01630 113 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm11011D3Z3L9 86 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm21060J3KMU4 56 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Tcl1b3P56842 122 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Ypel4Q65Z93 127 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Rnf185Q91YT2 192 aa8.33□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 CstadQ9D245 104 aa8.32□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Rif1Q6PR54 2419 aaKnown RBP8.32□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 P01659 112 aa8.31□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 P01823 113 aa8.31□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Pla2g2eQ9QUL3 142 aa8.31□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Wisp2Q9Z0G4 251 aa8.31□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 TshbP12656 138 aa8.3□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm9887F6RFI0 207 aa8.3□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm5468Q8C3D3 155 aa8.3□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm10647E9Q8X0 124 aa8.3□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 DscamQ9ERC8 2013 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 P04944 107 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm20604F8WIA3 75 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 NrgnP60761 78 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Gm26566Q8CAC1 153 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 A0A286YE49 62 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 U90926O08546 118 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Psmb11Q8BG41 302 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Fgf23Q9EPC2 251 aa8.29□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Serp1Q9Z1W5 66 aa8.28□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Smrp1Q2MH31 260 aa8.28□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 MgamB5THE2 1827 aa8.28□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Wfdc6bF6ULY1 148 aa8.28□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Hcfc1Q61191 2045 aaKnown RBP8.28□□□□□ -1.08
Gtf3c1-201ENSMUST00000055506 Smim1P0C8K7 78 aa8.27□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Gm9958Q8C9U4 106 aa8.27□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Ovol3D3YYM0 189 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Q9D8Q6 235 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 BC067074F6RXI4 2391 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Kif26aQ52KG5 1881 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Znf239P24399 201 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Map6d1Q14BB9 191 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 4930432M17RikQ3V0W9 174 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 4930519P11RikQ9CUJ8 166 aa8.26□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 OtoglF7A4A7 2325 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 P04943 107 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Tcte2E9PY37 120 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Rnase1P00683 149 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 SrarpQ3ULG3 163 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 9130230L23RikQ8CC80 163 aa8.25□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Gm19935A0A1B0GSF9 52 aa8.24□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Igkv8-30A0A140T8M3 121 aa8.24□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 P01820 115 aa8.24□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 1700011M02RikB1AX35 88 aa8.23□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 9430015G10RikA2ASP7 199 aa8.23□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Igf2rQ07113 2483 aaKnown RBP8.23□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Gm5153P01627 120 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Gm4707V9GXN5 68 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Zfand3Q497H0 227 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Csdc2Q91YQ3 154 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Wdr90Q6ZPG2 1874 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Gm5878E9PUB3 99 aa8.22□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 Obox2E9PXV9 151 aa8.21□□□□□ -1.09
Gtf3c1-201ENSMUST00000055506 PrlhG3UWC3 86 aa8.21□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ighv1-75A0A075B5Y2 117 aa8.21□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 TeppQ6IMH0 216 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Cox8cA6H666 72 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 PlaurP35456 327 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Spink13Q3UTS8 97 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ighv1-61P01749 117 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Dazap2Q9DCP9 168 aa8.2□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ly6c2P0CW03 131 aa8.19□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Kiaa1549Q68FD9 1940 aa8.19□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Bean1Q9EQG5 255 aa8.19□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Gm10135F6TEE5 83 aa8.19□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Myo9aQ8C170 2542 aa8.19□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ighv2-3A0A075B696 115 aa8.18□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ifitm6A0A1B0GS75 124 aa8.17□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Wfdc17Q5SSJ1 76 aa8.17□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Wfdc15aQ8BH89 80 aa8.16□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Gpha2Q925Q5 128 aa8.16□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ighv1-66A0A075B5X5 117 aa8.16□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 1110002E22RikE0CYV9 1786 aa8.16□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Ube2d1P61080 147 aaKnown RBP8.16□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Eif4ebp1Q60876 117 aa8.15□□□□□ -1.1
Gtf3c1-201ENSMUST00000055506 Defb37Q7TMD2 62 aa8.15□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms