RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 P01811 117 aa12.36□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Higd1aQ9JLR9 95 aa12.36□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Lmo4P61969 165 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Defa26Q3L180 93 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm10036E9PYL9 178 aaKnown RBP12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 ScxQ64124 207 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ifitm1Q9D103 106 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm9747Q810H1 104 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Spink12Q9D256 87 aa12.35□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ighv3-8A0A075B5T0 131 aa12.34□□□□□ -0.43
Ctcf-201ENSMUST00000005841 A530064D06RikQ8BNV8 229 aa12.34□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ifitm10Q8BR26 201 aa12.34□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Q5BN45 167 aa12.34□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm17334Q8C6U3 126 aa12.33□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm35549A0A0N4SUS7 141 aa12.33□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Fam19a4Q7TPG5 135 aa12.33□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Spta1P08032 2415 aa12.33□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Ighv2-3A0A075B696 115 aa12.32□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Trav7-6A0A075B640 112 aa12.32□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Trav4-3A0A0B4J1K1 110 aa12.32□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Gm11444F6QMA6 170 aa12.31□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Rnf152Q8BG47 203 aa12.31□□□□□ -0.44
Ctcf-201ENSMUST00000005841 BC106179Q8C9L1 186 aa12.31□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Foxc1Q61572 553 aa12.31□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Lrcol1Q3URS3 161 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 NbeaQ9EPN1 2936 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Gm17732E9Q5I2 61 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Gm10322F7D7I4 111 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Mob4Q6PEB6 225 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Pgpep1lQ9CWB5 130 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 4930564D02RikQ9D4S4 103 aa12.3□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Dmbt1Q60997 2085 aa12.29□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Csdc2Q91YQ3 154 aa12.29□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Hist1h4aP62806 103 aaKnown RBP12.29□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Gata1P17679 413 aa12.28□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Rpl11Q9CXW4 178 aaKnown RBP12.28□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Edn2P22389 175 aa12.27□□□□□ -0.44
Ctcf-201ENSMUST00000005841 Gvin1Q80SU7 2427 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Chd9Q8BYH8 2885 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Zfp292Q9Z2U2 2698 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Casp6O08738 276 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 TeppQ6IMH0 216 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Spink10Q8CAC8 162 aa12.27□□□□□ -0.45
Ctcf-201ENSMUST00000005841 PkigO70139 76 aa12.26□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10271F6WY25 52 aa12.26□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Prr3Q811B5 190 aaKnown RBP12.26□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ndufa11Q9D8B4 141 aa12.26□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Glrp1E9Q9S8 174 aa12.25□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Sprr3O09116 238 aa12.25□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10509O88255 85 aa12.25□□□□□ -0.45
Ctcf-201ENSMUST00000005841 4930432M17RikQ3V0W9 174 aa12.24□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10226O88253 85 aa12.24□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ss18l2Q9D174 77 aa12.24□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Lyrm7Q9DA03 104 aa12.24□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Rmi2Q3UPE3 149 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ptprz1B9EKR1 2312 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 OdaphJ3QNT8 126 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 TtrP07309 147 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Fam216aQ9DB54 251 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10490F6VBM2 120 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 P01726 129 aa12.23□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ighv5-8A0A075B676 92 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10767Q3TQP0 103 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Hes7Q8BKT2 225 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Sostdc1Q9CQN4 206 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm29423A0A087WRM1 55 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ighv1-61P01749 117 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Gm10521E9PZK0 135 aa12.22□□□□□ -0.45
Ctcf-201ENSMUST00000005841 4930415O20RikQ8CDT5 131 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Tmem101Q91VP7 257 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 OtogO55225 2910 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Trav6-4A0A075B6B4 115 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Igkv4-68A0A0B4J1I7 117 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ly86O88188 162 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 RetnQ99P87 114 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 4930519P11RikQ9CUJ8 166 aa12.21□□□□□ -0.45
Ctcf-201ENSMUST00000005841 Ins2P01326 110 aa12.21□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Egr1P08046 533 aa12.21□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Gm5089A1L3C8 106 aa12.2□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Fgfbp3Q1HCM0 245 aa12.2□□□□□ -0.46
Ctcf-201ENSMUST00000005841 B230217C12RikE9Q3Z1 139 aa12.2□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Spry2Q9QXV8 315 aa12.2□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Tln1P26039 2541 aaKnown RBP12.2□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Ighv1-11A0A0A6YWI9 117 aa12.19□□□□□ -0.46
Ctcf-201ENSMUST00000005841 MsmbO08540 113 aa12.19□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Gm4861Q8C5A4 106 aa12.19□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Gm9195A0A140LHT4 2805 aa12.19□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Gm11565A2A4M7 156 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 4930546C10RikE9Q4Y3 121 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Igkv4-78A0A0A6YYE5 119 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Ndufs7Q9DC70 224 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Gm17472A0A075B683 117 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 G430095P16RikE9Q913 147 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Pip4p1Q3TWL2 284 aa12.18□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Trav3-4A0A075B654 114 aa12.17□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Map1bP14873 2464 aaKnown RBP12.17□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Wfdc11A2A5H7 82 aa12.17□□□□□ -0.46
Ctcf-201ENSMUST00000005841 P01753 117 aa12.16□□□□□ -0.46
Ctcf-201ENSMUST00000005841 GalmQ8K157 342 aa12.16□□□□□ -0.46
Ctcf-201ENSMUST00000005841 Spata25Q9DA57 226 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms