RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ss18l2Q9D174 77 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Pfn2Q9JJV2 140 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Reg3dQ9QUS9 175 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Prh1P05142 261 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Atp6v0e2Q91XE7 81 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Gemin7Q9CWY4 129 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Klk11Q9QYN3 276 aa8.96□□□□□ -0.97
Pcif1-201ENSMUST00000041643 Ighv1-82A0A0G2JEU7 117 aa8.96□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm9747Q810H1 104 aa8.96□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Sfta2E9PXB6 77 aa8.96□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Higd2aQ9CQJ1 106 aa8.96□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ighv2-3A0A075B696 115 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ighv6-7A0A0A6YWU3 119 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm15294V9GXA7 121 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Igkv8-16A0A0G2JDG9 121 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Lect2O88803 151 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Egr2P08152 470 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm14137Q8CE97 175 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm8439G3UWA7 96 aa8.95□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm4861Q8C5A4 106 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 A130051J06RikQ8CAU1 227 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Trav9d-4A0A0G2JG37 103 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Rmi2Q3UPE3 149 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Cd27P41272 250 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm26566Q8CAC1 153 aa8.94□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Igkv4-74A0A0B4J1I3 119 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Defa-rs7P50715 91 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Rpl39P62892 51 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ndufa4l2Q4FZG9 87 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 MturnQ8CGA4 131 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ighv1-75A0A075B5Y2 117 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm45785A0A1B0GT05 94 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 4930442H23RikQ9D5G7 103 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Morn5Q9DAI9 170 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Crlf1Q9JM58 425 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Vsig4F6TUL9 280 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 1700056E22RikF7CNM6 234 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Fam222aQ6PGH4 453 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Smrp1Q2MH31 260 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 D130052B06RikQ3UW13 202 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Lypd6Q8BPP5 171 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Znhit3Q9CQK1 151 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Pcnx2Q5DU28 2122 aa8.93□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ep400Q8CHI8 3072 aaKnown RBP8.92□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Col6a4A2AX52 2309 aa8.92□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Igkv4-68A0A0B4J1I7 117 aa8.92□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Ncoa6Q9JL19 2067 aa8.92□□□□□ -0.98
Pcif1-201ENSMUST00000041643 NbasE9Q411 2356 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Cfc1P97766 202 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 FshbQ60687 130 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Dopey2Q3UHQ6 2295 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm20730A0A075B5J6 119 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 E130114P18RikF6S0S7 154 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 P84751 237 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Spry2Q9QXV8 315 aa8.91□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Fxyd5P97808 178 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 HampQ9EQ21 83 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Flg2Q2VIS4 2362 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Trav4n-4A0A075B615 110 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Foxc1Q61572 553 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 SpinklQ8CEK3 90 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Mrpl35Q9CQL6 188 aa8.9□□□□□ -0.98
Pcif1-201ENSMUST00000041643 Gm9767G3X930 207 aa8.9□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Zfp951A0A087WRH0 451 aa8.9□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Gm16381A0A1Y7VKT9 73 aa8.9□□□□□ -0.99
Pcif1-201ENSMUST00000041643 NpsP0C0P8 89 aa8.9□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Q9D131 166 aa8.9□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Gm10767Q3TQP0 103 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ly6g5bQ8K1T4 194 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Fhl2O70433 279 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 LeprotO89013 131 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Znf239P24399 201 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ebi3O35228 228 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Hbb-b2P02089 147 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Cfap126Q6P8X9 189 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 E130218I03RikA0A0U1RNU5 63 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ndufa1O35683 70 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Znrf2Q71FD5 238 aa8.89□□□□□ -0.99
Pcif1-201ENSMUST00000041643 DysfQ9ESD7 2090 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 NpyP57774 97 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Klk5Q9D140 293 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Fam19a4Q7TPG5 135 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 1520401A03RikA0A0J9YVH6 598 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Psmb8P28063 276 aa8.88□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Timm17aQ9Z0V8 171 aa8.87□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Q9D8Q6 235 aa8.87□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Igkv4-59A0A0B4J1I8 117 aa8.87□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Smim26Q3V460 107 aa8.87□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Tal2Q62282 108 aa8.87□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Defa28D3Z1V9 94 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Gm7102J3QQ10 178 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ube2v1Q9CZY3 147 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Foxi2Q3I5G5 311 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Trav6n-6A0A075B6B2 114 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Lamtor3O88653 124 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Sh2d1aO88890 126 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 PemtQ61907 199 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 BC048502Q80Y74 154 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Ighv1-63A0A075B5X2 117 aa8.86□□□□□ -0.99
Pcif1-201ENSMUST00000041643 Trav13d-1A0A075B606 110 aa8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 95.6 ms