RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 CCDC196A0A1B0GTZ2 297 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 SMIM22K7EJ46 135 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 FIBPO43427 364 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
PHGDH-216ENST00000641375 PPP2R5BQ15173 497 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 SEC23AQ15436 765 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
PHGDH-216ENST00000641375 PDGFDQ9GZP0 370 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-216ENST00000641375 SCAND2PQ9GZW5 306 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-216ENST00000641375 ISY1Q9ULR0 285 aaKnown RBP19.19■□□□□ 0.66
PHGDH-216ENST00000641375 ROBO3Q96MS0 1386 aa19.18■□□□□ 0.66
PHGDH-216ENST00000641375 USP17L8P0C7I0 530 aa19.18■□□□□ 0.66
PHGDH-216ENST00000641375 RESTQ13127 1097 aa19.18■□□□□ 0.66
PHGDH-216ENST00000641375 CAVIN1Q6NZI2 390 aaKnown RBP19.18■□□□□ 0.66
PHGDH-216ENST00000641375 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
PHGDH-216ENST00000641375 MYH15Q9Y2K3 1946 aa19.18■□□□□ 0.66
PHGDH-216ENST00000641375 PRDM1O75626 825 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 RXRAP19793 462 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 CDC27P30260 824 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 UBE2HP62256 183 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 TEX11Q8IYF3 940 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 C8orf76Q96K31 380 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 FOCADQ5VW36 1801 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 SUPT20HQ8NEM7 779 aa19.17■□□□□ 0.66
PHGDH-216ENST00000641375 PPFIA3O75145 1194 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 CYP2D6P10635 497 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 NTRK3Q16288 839 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 IFIT1BQ5T764 474 aaKnown RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 ZNF654Q8IZM8 581 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 ENAHQ8N8S7 591 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 MYL10Q9BUA6 226 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 ZNF287Q9HBT7 754 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 ELP1O95163 1332 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 GOLGA6L3A6NEY3 463 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 IARSP41252 1262 aaKnown RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 RHBDL3P58872 404 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 FKBP1AP62942 108 aaKnown RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 RTN1Q16799 776 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 CERS5Q8N5B7 392 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 SYAP1Q96A49 352 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 FAM217BQ9NTX9 383 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 CFAP45Q9UL16 551 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 TTF2Q9UNY4 1162 aaKnown RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 DAGLAQ9Y4D2 1042 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 STK36Q9NRP7 1315 aa19.16■□□□□ 0.66
PHGDH-216ENST00000641375 DDX60LQ5H9U9 1706 aaKnown RBP19.16■□□□□ 0.66
PHGDH-216ENST00000641375 MYH1P12882 1939 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-216ENST00000641375 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 DBNDD1Q9H9R9 158 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 TSPY2A6NKD2 308 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 GADD45BO75293 160 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-216ENST00000641375 IFNAR1P17181 557 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 STRIP1Q5VSL9 837 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 CATIPQ7Z7H3 387 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 TTLL6Q8N841 843 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 FANCBQ8NB91 859 aa19.15■□□□□ 0.66
PHGDH-216ENST00000641375 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-216ENST00000641375 SNED1Q8TER0 1413 aa19.14■□□□□ 0.66
PHGDH-216ENST00000641375 CALM1P0DP23 149 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 CALM2P0DP24 149 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 CALM3P0DP25 149 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 FOSBP53539 338 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 SSRP1Q08945 709 aaKnown RBP19.14■□□□□ 0.65
PHGDH-216ENST00000641375 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.65
PHGDH-216ENST00000641375 FAM173BQ6P4H8 233 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 HHIPL2Q6UWX4 724 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 WASF1Q92558 559 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 FLT1P17948 1338 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.65
PHGDH-216ENST00000641375 ECE2O60344 883 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 EVX2Q03828 476 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 CCDC178Q5BJE1 867 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 MKNK2Q9HBH9 465 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-216ENST00000641375 KIAA2012Q0VF49 1180 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 ZSCAN23Q3MJ62 389 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 NUP133Q8WUM0 1156 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 PHKBQ93100 1093 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 TEKT1Q969V4 418 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 SPATA32Q96LK8 384 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 ALG1Q9BT22 464 aa19.13■□□□□ 0.65
PHGDH-216ENST00000641375 DDAH1O94760 285 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 FMNL1O95466 1100 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-216ENST00000641375 GUCY1B3Q02153 619 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 ECM29Q5VYK3 1845 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 ZNF445P59923 1031 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 SLC4A8Q2Y0W8 1093 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 FAM47AQ5JRC9 791 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 RTKN2Q8IZC4 609 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 ZNF396Q96N95 335 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-216ENST00000641375 MRIQ9BWK5 157 aa19.12■□□□□ 0.65
PHGDH-216ENST00000641375 RBM28Q9NW13 759 aaKnown RBP19.12■□□□□ 0.65
PHGDH-216ENST00000641375 TMEM63CQ9P1W3 806 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms