RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
PHGDH-213ENST00000641272 GABRQQ9UN88 632 aa20.53■□□□□ 0.88
PHGDH-213ENST00000641272 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
PHGDH-213ENST00000641272 GRK4P32298 578 aa20.52■□□□□ 0.88
PHGDH-213ENST00000641272 NAA16Q6N069 864 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-213ENST00000641272 MIER1Q8N108 512 aa20.52■□□□□ 0.88
PHGDH-213ENST00000641272 NOL10Q9BSC4 688 aaKnown RBP20.52■□□□□ 0.88
PHGDH-213ENST00000641272 BIN2Q9UBW5 565 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-213ENST00000641272 HOXD10P28358 340 aa20.51■□□□□ 0.87
PHGDH-213ENST00000641272 RRP1BQ14684 758 aaKnown RBP20.51■□□□□ 0.87
PHGDH-213ENST00000641272 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
PHGDH-213ENST00000641272 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
PHGDH-213ENST00000641272 AGTPBP1Q9UPW5 1226 aa20.51■□□□□ 0.87
PHGDH-213ENST00000641272 ZAP70P43403 619 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 MAPKAPK5Q8IW41 473 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 GPR108Q9NPR9 543 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 DBNLQ9UJU6 430 aaKnown RBP20.5■□□□□ 0.87
PHGDH-213ENST00000641272 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
PHGDH-213ENST00000641272 TBC1D12O60347 775 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
PHGDH-213ENST00000641272 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-213ENST00000641272 CCL5P13501 91 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 HMGCS2P54868 508 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 SPP2Q13103 211 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 ANKRD13CQ8N6S4 541 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 CCDC8Q9H0W5 538 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-213ENST00000641272 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
PHGDH-213ENST00000641272 SLC45A1Q9Y2W3 748 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 FLT1P17948 1338 aa20.49■□□□□ 0.87
PHGDH-213ENST00000641272 TNPO2O14787 897 aaKnown RBP20.48■□□□□ 0.87
PHGDH-213ENST00000641272 ELNP15502 786 aa20.48■□□□□ 0.87
PHGDH-213ENST00000641272 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-213ENST00000641272 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
PHGDH-213ENST00000641272 TGFBRAP1Q8WUH2 860 aa20.48■□□□□ 0.87
PHGDH-213ENST00000641272 NDUFB9Q9Y6M9 179 aa20.48■□□□□ 0.87
PHGDH-213ENST00000641272 MYH1P12882 1939 aa20.48■□□□□ 0.87
PHGDH-213ENST00000641272 MAP4K4O95819 1239 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-213ENST00000641272 ZNF280CQ8ND82 737 aa20.47■□□□□ 0.87
PHGDH-213ENST00000641272 RNF208Q9H0X6 261 aa20.47■□□□□ 0.87
PHGDH-213ENST00000641272 DNAJC18Q9H819 358 aa20.47■□□□□ 0.87
PHGDH-213ENST00000641272 SAP30BPQ9UHR5 308 aaKnown RBP20.47■□□□□ 0.87
PHGDH-213ENST00000641272 DOCK3Q8IZD9 2030 aa20.47■□□□□ 0.87
PHGDH-213ENST00000641272 GDF11O95390 407 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 CAP2P40123 477 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 FLT3LGP49771 235 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 DYNLL1P63167 89 aaKnown RBP20.46■□□□□ 0.87
PHGDH-213ENST00000641272 UBXN2AP68543 259 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 SLAIN1Q8ND83 568 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 UNC93B1Q9H1C4 597 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 PNMA3Q9UL41 463 aa20.46■□□□□ 0.87
PHGDH-213ENST00000641272 ADCY3O60266 1144 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 BAG3O95817 575 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 JAG1P78504 1218 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 MTMR2Q13614 643 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-213ENST00000641272 PANK1Q8TE04 598 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-213ENST00000641272 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
PHGDH-213ENST00000641272 EXOC6BQ9Y2D4 811 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 NAV1Q8NEY1 1877 aa20.45■□□□□ 0.86
PHGDH-213ENST00000641272 DDX60LQ5H9U9 1706 aaKnown RBP20.44■□□□□ 0.86
PHGDH-213ENST00000641272 USP17L5A8MUK1 530 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 ZBTB7BO15156 539 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-213ENST00000641272 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
PHGDH-213ENST00000641272 INHAP05111 366 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 PLCG2P16885 1265 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 CEP85Q6P2H3 762 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 CRACR2BQ8N4Y2 399 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-213ENST00000641272 MIGA1Q8NAN2 632 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 TRIM34Q9BYJ4 488 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 PALD1Q9ULE6 856 aa20.44■□□□□ 0.86
PHGDH-213ENST00000641272 H0YGN5 161 aa20.43■□□□□ 0.86
PHGDH-213ENST00000641272 CYP7A1P22680 504 aa20.43■□□□□ 0.86
PHGDH-213ENST00000641272 FAM110CQ1W6H9 321 aa20.43■□□□□ 0.86
PHGDH-213ENST00000641272 AS3MTQ9HBK9 375 aa20.43■□□□□ 0.86
PHGDH-213ENST00000641272 PI4KBQ9UBF8 816 aa20.43■□□□□ 0.86
PHGDH-213ENST00000641272 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
PHGDH-213ENST00000641272 PLXNB2O15031 1838 aa20.42■□□□□ 0.86
PHGDH-213ENST00000641272 PEX10O60683 326 aa20.42■□□□□ 0.86
PHGDH-213ENST00000641272 GJB1P08034 283 aa20.42■□□□□ 0.86
PHGDH-213ENST00000641272 GJA8P48165 433 aa20.42■□□□□ 0.86
PHGDH-213ENST00000641272 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
PHGDH-213ENST00000641272 ASCC2Q9H1I8 757 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-213ENST00000641272 DHX36Q9H2U1 1008 aaKnown RBP20.42■□□□□ 0.86
PHGDH-213ENST00000641272 CEP290O15078 2479 aa20.42■□□□□ 0.86
PHGDH-213ENST00000641272 PPP4CP60510 307 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 AACSQ86V21 672 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 U2AF1L4Q8WU68 220 aaKnown RBP20.41■□□□□ 0.86
PHGDH-213ENST00000641272 COA7Q96BR5 231 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 ZNF512BQ96KM6 892 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-213ENST00000641272 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 ANTXR1Q9H6X2 564 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 COLQQ9Y215 455 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-213ENST00000641272 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
PHGDH-213ENST00000641272 APBB1O00213 710 aa20.4■□□□□ 0.86
PHGDH-213ENST00000641272 FARP2O94887 1054 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms