RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
RTTN-220ENST00000640654 DUSP23Q9BVJ7 150 aa6.61□□□□□ -1.35
RTTN-220ENST00000640654 PTPRKQ15262 1439 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 LEFTY1O75610 366 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 AFMP43652 599 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 ZP2Q05996 745 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 ZC3H12CQ9C0D7 883 aaKnown RBP6.6□□□□□ -1.35
RTTN-220ENST00000640654 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
RTTN-220ENST00000640654 SUPT16HQ9Y5B9 1047 aaKnown RBP6.6□□□□□ -1.35
RTTN-220ENST00000640654 U3KQE9 123 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 KIF21AQ7Z4S6 1674 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 PTPN23Q9H3S7 1636 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 NCOA2Q15596 1464 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 CCDC18Q5T9S5 1454 aa6.6□□□□□ -1.35
RTTN-220ENST00000640654 PDS5BQ9NTI5 1447 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 SUPT6HQ7KZ85 1726 aaKnown RBP6.59□□□□□ -1.35
RTTN-220ENST00000640654 NCANO14594 1321 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 HCLS1P14317 486 aaPredicted RBP6.59□□□□□ -1.35
RTTN-220ENST00000640654 FKBP4Q02790 459 aaKnown RBP eCLIP6.59□□□□□ -1.35
RTTN-220ENST00000640654 KIF4BQ2VIQ3 1234 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
RTTN-220ENST00000640654 SYDE1Q6ZW31 735 aaPredicted RBP6.59□□□□□ -1.35
RTTN-220ENST00000640654 TOP6BLQ8N6T0 577 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 KRT82Q9NSB4 513 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 GTF2IRD1Q9UHL9 959 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 PLAGL2Q9UPG8 496 aa6.59□□□□□ -1.35
RTTN-220ENST00000640654 THOC2Q8NI27 1593 aaKnown RBP6.59□□□□□ -1.35
RTTN-220ENST00000640654 MYOM3Q5VTT5 1437 aa6.59□□□□□ -1.36
RTTN-220ENST00000640654 TARBP1Q13395 1621 aaKnown RBP6.58□□□□□ -1.36
RTTN-220ENST00000640654 B8ZZF3 427 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 NFIBO00712 420 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 PRRG2O14669 202 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 ZSCAN22P10073 491 aaPredicted RBP6.58□□□□□ -1.36
RTTN-220ENST00000640654 CILP2Q8IUL8 1156 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
RTTN-220ENST00000640654 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
RTTN-220ENST00000640654 TNKS2Q9H2K2 1166 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 DISC1Q9NRI5 854 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 EHBP1L1Q8N3D4 1523 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 HFM1A2PYH4 1435 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 UACAQ9BZF9 1416 aa6.58□□□□□ -1.36
RTTN-220ENST00000640654 UGGT2Q9NYU1 1516 aa6.57□□□□□ -1.36
RTTN-220ENST00000640654 ABL1P00519 1130 aa6.57□□□□□ -1.36
RTTN-220ENST00000640654 GSTP1P09211 210 aaKnown RBP6.57□□□□□ -1.36
RTTN-220ENST00000640654 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.57□□□□□ -1.36
RTTN-220ENST00000640654 HIRIP3Q9BW71 556 aaPredicted RBP6.57□□□□□ -1.36
RTTN-220ENST00000640654 CTNND2Q9UQB3 1225 aa6.57□□□□□ -1.36
RTTN-220ENST00000640654 NAIPQ13075 1403 aa6.57□□□□□ -1.36
RTTN-220ENST00000640654 ARHGEF11O15085 1522 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 MAGI3Q5TCQ9 1506 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 PBRM1Q86U86 1689 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 ZNF862O60290 1169 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 GLI1P08151 1106 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 SSFA2P28290 1259 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 LCNL1Q6ZST4 164 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 C1QL4Q86Z23 238 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 LMCD1Q9NZU5 365 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 TONSLQ96HA7 1378 aa6.56□□□□□ -1.36
RTTN-220ENST00000640654 TCOF1Q13428 1488 aaKnown RBP6.55□□□□□ -1.36
RTTN-220ENST00000640654 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 CPNE3O75131 537 aaKnown RBP6.55□□□□□ -1.36
RTTN-220ENST00000640654 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
RTTN-220ENST00000640654 PPP2R3AQ06190 1150 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 RAPGEFL1Q9UHV5 662 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 SERPINA10Q9UK55 444 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 BRPF3Q9ULD4 1205 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 TRAK1Q9UPV9 953 aa6.55□□□□□ -1.36
RTTN-220ENST00000640654 HECW1Q76N89 1606 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 IGF2BP3O00425 579 aaKnown RBP eCLIP6.54□□□□□ -1.36
RTTN-220ENST00000640654 GADD45BO75293 160 aaPredicted RBP6.54□□□□□ -1.36
RTTN-220ENST00000640654 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 PRPF40BQ6NWY9 871 aaKnown RBP6.54□□□□□ -1.36
RTTN-220ENST00000640654 CYFIP1Q7L576 1253 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
RTTN-220ENST00000640654 KCNB2Q92953 911 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 ISL2Q96A47 359 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 ABCB6Q9NP58 842 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
RTTN-220ENST00000640654 PCDHGC5Q9Y5F6 944 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
RTTN-220ENST00000640654 ADAMTS12P58397 1594 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 IQGAP2Q13576 1575 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.53□□□□□ -1.36
RTTN-220ENST00000640654 ANP32CO43423 234 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 CLCN7P51798 805 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 PRR23BQ6ZRT6 265 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 RRP7BPQ9NSQ0 103 aa6.53□□□□□ -1.36
RTTN-220ENST00000640654 KDM5BQ9UGL1 1544 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms