RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 L3MBTL3Q96JM7 780 aaPredicted RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 CNNM2Q9H8M5 875 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 ADARB2Q9NS39 739 aaKnown RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 HACL1Q9UJ83 578 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 NEDD4P46934 1319 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 DDTLA6NHG4 134 aaPredicted RBP10.37□□□□□ -0.75
HLA-B-258ENST00000640615 B4E1Z4 1266 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 ST18O60284 1047 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 PRDM1O75626 825 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 RPS6KB1P23443 525 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 TNNI2P48788 182 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
HLA-B-258ENST00000640615 PDE4BQ07343 736 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 FKBP1CQ5VVH2 108 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 DHX32Q7L7V1 743 aaKnown RBP10.37□□□□□ -0.75
HLA-B-258ENST00000640615 FAM151AQ8WW52 585 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 KRT23Q9C075 422 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 PDRG1Q9NUG6 133 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
HLA-B-258ENST00000640615 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 PCP11498 1178 aaKnown RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 MCM5P33992 734 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 EPHX2P34913 555 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 FGD1P98174 961 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 TNFAIP1Q13829 316 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 RASA3Q14644 834 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 ANGEL2Q5VTE6 544 aaKnown RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 SH3BP5LQ7L8J4 393 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 CHST3Q7LGC8 479 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 FAM83AQ86UY5 434 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 TCEANC2Q96MN5 208 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 ZNF287Q9HBT7 754 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 PI4KBQ9UBF8 816 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 SCAF8Q9UPN6 1271 aaKnown RBP10.36□□□□□ -0.75
HLA-B-258ENST00000640615 CNTNAP1P78357 1384 aa10.36□□□□□ -0.75
HLA-B-258ENST00000640615 PRC1O43663 620 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 ORC4O43929 436 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 KDM4AO75164 1064 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 FGRP09769 529 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 CDK8P49336 464 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 EXOSC10Q01780 885 aaKnown RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 COL13A1Q5TAT6 717 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 C16orf86Q6ZW13 317 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 USP50Q70EL3 339 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 CYB5R4Q7L1T6 521 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 APOBEC3FQ8IUX4 373 aaKnown RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 NKX2-3Q8TAU0 364 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 ESR2Q92731 530 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 CSRNP1Q96S65 589 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 TMEM39BQ9GZU3 492 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 GGA3Q9NZ52 723 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 ZSWIM5Q9P217 1185 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
HLA-B-258ENST00000640615 SCN4AP35499 1836 aa10.35□□□□□ -0.75
HLA-B-258ENST00000640615 SLURP2P0DP57 97 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 TFAP4Q01664 338 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 BECN1Q14457 450 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 EAPPQ56P03 285 aaPredicted RBP10.34□□□□□ -0.75
HLA-B-258ENST00000640615 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 Q6ZUG5 572 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 NOL8Q76FK4 1167 aaKnown RBP10.34□□□□□ -0.75
HLA-B-258ENST00000640615 HSCBQ8IWL3 235 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 SNX21Q969T3 373 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
HLA-B-258ENST00000640615 TTC14Q96N46 770 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 LRRC2Q9BYS8 371 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 EHD4Q9H223 541 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 TAF1DQ9H5J8 278 aaPredicted RBP10.34□□□□□ -0.75
HLA-B-258ENST00000640615 SWAP70Q9UH65 585 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 ATRNL1Q5VV63 1379 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 ROBO3Q96MS0 1386 aa10.34□□□□□ -0.75
HLA-B-258ENST00000640615 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 IFIT3O14879 490 aaKnown RBP10.33□□□□□ -0.76
HLA-B-258ENST00000640615 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
HLA-B-258ENST00000640615 TSPY3P0CV98 308 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 TSPY8P0CW00 308 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 RASA1P20936 1047 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 MCM2P49736 904 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 AK2P54819 239 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 ANTXR2P58335 489 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 GABPAQ06546 454 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 ANKRD1Q15327 319 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 PNMA8AQ86V59 439 aaPredicted RBP10.33□□□□□ -0.76
HLA-B-258ENST00000640615 ZKSCAN3Q9BRR0 538 aa10.33□□□□□ -0.76
HLA-B-258ENST00000640615 LARP6Q9BRS8 491 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms