RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 COL2A1P02458 1487 aaPredicted RBP17.92■□□□□ 0.46
GFAP-236ENST00000640545 HLA-DOAP06340 250 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 CAP2P40123 477 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 MOGSQ13724 837 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 SLC4A8Q2Y0W8 1093 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 KIF1BPQ96EK5 621 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 ARHGAP39Q9C0H5 1083 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 AS3MTQ9HBK9 375 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 TLR7Q9NYK1 1049 aaKnown RBP17.91■□□□□ 0.46
GFAP-236ENST00000640545 PNMA3Q9UL41 463 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
GFAP-236ENST00000640545 FAM196BA6NMK8 535 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
GFAP-236ENST00000640545 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
GFAP-236ENST00000640545 CYP2C8P10632 490 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 FCGRTP55899 365 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 CAP1Q01518 475 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
GFAP-236ENST00000640545 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
GFAP-236ENST00000640545 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 RHPN1Q8TCX5 695 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 RAET1EQ8TD07 263 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 ZNF333Q96JL9 665 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 PIH1D3Q9NQM4 214 aaKnown RBP17.9■□□□□ 0.46
GFAP-236ENST00000640545 DOCK2Q92608 1830 aa17.9■□□□□ 0.46
GFAP-236ENST00000640545 RAB11FIP3O75154 756 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 SLURP2P0DP57 97 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 USP5P45974 858 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 SPP2Q13103 211 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 MAGEB6Q8N7X4 407 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 PROCA1Q8NCQ7 364 aaPredicted RBP17.89■□□□□ 0.45
GFAP-236ENST00000640545 IL1RAPL2Q9NP60 686 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 SRRDQ9UH36 339 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 AGTPBP1Q9UPW5 1226 aa17.89■□□□□ 0.45
GFAP-236ENST00000640545 POTEFA5A3E0 1075 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 APBB1O00213 710 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 ASNSP08243 561 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 PRPF38BQ5VTL8 546 aaKnown RBP17.88■□□□□ 0.45
GFAP-236ENST00000640545 TRIM47Q96LD4 638 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 GINM1Q9NU53 330 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 FLT1P17948 1338 aa17.88■□□□□ 0.45
GFAP-236ENST00000640545 BCRP11274 1271 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 OSBPP22059 807 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 ADGRA1Q86SQ6 560 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 PALD1Q9ULE6 856 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 MYPNQ86TC9 1320 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 ADGRA2Q96PE1 1338 aa17.87■□□□□ 0.45
GFAP-236ENST00000640545 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
GFAP-236ENST00000640545 MIGA1Q8NAN2 632 aa17.86■□□□□ 0.45
GFAP-236ENST00000640545 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
GFAP-236ENST00000640545 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
GFAP-236ENST00000640545 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
GFAP-236ENST00000640545 BIN2Q9UBW5 565 aaPredicted RBP17.86■□□□□ 0.45
GFAP-236ENST00000640545 MYCP01106 439 aaPredicted RBP17.85■□□□□ 0.45
GFAP-236ENST00000640545 EN2P19622 333 aaPredicted RBP17.85■□□□□ 0.45
GFAP-236ENST00000640545 GRK4P32298 578 aa17.85■□□□□ 0.45
GFAP-236ENST00000640545 HTTP42858 3142 aa17.85■□□□□ 0.45
GFAP-236ENST00000640545 HMGCS2P54868 508 aa17.85■□□□□ 0.45
GFAP-236ENST00000640545 DYNLL1P63167 89 aaKnown RBP17.85■□□□□ 0.45
GFAP-236ENST00000640545 PDE3AQ14432 1141 aa17.85■□□□□ 0.45
GFAP-236ENST00000640545 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
GFAP-236ENST00000640545 SAP30BPQ9UHR5 308 aaKnown RBP17.85■□□□□ 0.45
GFAP-236ENST00000640545 TNRC18O15417 2968 aaPredicted RBP17.85■□□□□ 0.45
GFAP-236ENST00000640545 PDE4DIPQ5VU43 2346 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 GCLCP48506 637 aaPredicted RBP17.84■□□□□ 0.45
GFAP-236ENST00000640545 UBXN2AP68543 259 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 METTL16Q86W50 562 aaKnown RBP17.84■□□□□ 0.45
GFAP-236ENST00000640545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.84■□□□□ 0.45
GFAP-236ENST00000640545 COA7Q96BR5 231 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 WDR18Q9BV38 432 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 NDUFB9Q9Y6M9 179 aa17.84■□□□□ 0.45
GFAP-236ENST00000640545 C19orf81C9J6K1 198 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 TNPO2O14787 897 aaKnown RBP17.83■□□□□ 0.44
GFAP-236ENST00000640545 CTGFP29279 349 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 TREML2Q5T2D2 321 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 SLC9C2Q5TAH2 1124 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 ANKRD13CQ8N6S4 541 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 NKX2-3Q8TAU0 364 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
GFAP-236ENST00000640545 DOCK1Q14185 1865 aa17.83■□□□□ 0.44
GFAP-236ENST00000640545 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 USP17L10C9JJH3 530 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 BACE1P56817 501 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 IRX3P78415 501 aaPredicted RBP17.82■□□□□ 0.44
GFAP-236ENST00000640545 PRKCZQ05513 592 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 FAM110CQ1W6H9 321 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 SERPINB13Q9UIV8 391 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 CENPFP49454 3210 aa17.82■□□□□ 0.44
GFAP-236ENST00000640545 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
GFAP-236ENST00000640545 GOLIM4O00461 696 aa17.81■□□□□ 0.44
GFAP-236ENST00000640545 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
GFAP-236ENST00000640545 MTMR2Q13614 643 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms