RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 PCDHB6Q9Y5E3 794 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 SLIT2O94813 1529 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
SPIN3-239ENST00000640463 WTAPQ15007 396 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 FBXO38Q6PIJ6 1188 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 UTP14AQ9BVJ6 771 aaKnown RBP16.04■□□□□ 0.16
SPIN3-239ENST00000640463 ABCA3Q99758 1704 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 LRP6O75581 1613 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 MMP1P03956 469 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 IFNAR1P17181 557 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 hCG_1642624A0A1W2PR95 340 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-239ENST00000640463 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIN3-239ENST00000640463 ERCC6LQ2NKX8 1250 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 USP49Q70CQ1 688 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
SPIN3-239ENST00000640463 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 SERTAD1Q9UHV2 236 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
SPIN3-239ENST00000640463 BCL9O00512 1426 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 FAM237AA0A1B0GTK4 181 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 NRDCO43847 1150 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 KRT23Q9C075 422 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 DNAI1Q9UI46 699 aa16.03■□□□□ 0.16
SPIN3-239ENST00000640463 WTIPA6NIX2 430 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-239ENST00000640463 TOP1P11387 765 aaKnown RBP16.02■□□□□ 0.16
SPIN3-239ENST00000640463 TRIM22Q8IYM9 498 aa16.02■□□□□ 0.16
SPIN3-239ENST00000640463 FAM177A1Q8N128 213 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-239ENST00000640463 INTS13Q9NVM9 706 aa16.02■□□□□ 0.16
SPIN3-239ENST00000640463 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.15
SPIN3-239ENST00000640463 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.15
SPIN3-239ENST00000640463 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.15
SPIN3-239ENST00000640463 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.15
SPIN3-239ENST00000640463 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.15
SPIN3-239ENST00000640463 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.15
SPIN3-239ENST00000640463 FAM205CA6NFA0 338 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-239ENST00000640463 MDM2Q00987 491 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-239ENST00000640463 VSTM4Q8IW00 320 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 ABCF2Q9UG63 623 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 FBXO2Q9UK22 296 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-239ENST00000640463 STK36Q9NRP7 1315 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 ERVV-1B6SEH8 477 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 CBFA2T2O43439 604 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 NACAP1Q9BZK3 213 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 ERICH2A1L162 156 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
SPIN3-239ENST00000640463 POSTNQ15063 836 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-239ENST00000640463 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
SPIN3-239ENST00000640463 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
SPIN3-239ENST00000640463 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 WASF1Q92558 559 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 EXOC5O00471 708 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 FANCGO15287 622 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 ZNF654Q8IZM8 581 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 FANCBQ8NB91 859 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 RGS22Q8NE09 1264 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
SPIN3-239ENST00000640463 CYP2D7A0A087X1C5 515 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 CDK11BP21127 795 aaKnown RBP15.99■□□□□ 0.15
SPIN3-239ENST00000640463 CYP7A1P22680 504 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 PTPREP23469 700 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 L2HGDHQ9H9P8 463 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 PRDM1O75626 825 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 UTP14CQ5TAP6 766 aaKnown RBP15.99■□□□□ 0.15
SPIN3-239ENST00000640463 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 DEXIO95424 95 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 CASP1P29466 404 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 ADKP55263 362 aaKnown RBP15.99■□□□□ 0.15
SPIN3-239ENST00000640463 ETF1P62495 437 aaKnown RBP15.99■□□□□ 0.15
SPIN3-239ENST00000640463 PPARAQ07869 468 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 UBAC1Q9BSL1 405 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
SPIN3-239ENST00000640463 CCDC93Q567U6 631 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 RILPL1Q5EBL4 403 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 CHRNDQ07001 517 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 EARS2Q5JPH6 523 aaKnown RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 REXO1L1PQ8IX06 675 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 MED15Q96RN5 788 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
SPIN3-239ENST00000640463 TNKSO95271 1327 aa15.98■□□□□ 0.15
SPIN3-239ENST00000640463 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
SPIN3-239ENST00000640463 GYG1P46976 350 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms