RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 PTPN22Q9Y2R2 807 aa17.58■□□□□ 0.4
HNRNPU-229ENST00000640440 CXCL11O14625 94 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 CYP7A1P22680 504 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 PPP4CP60510 307 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 ANTXR1Q9H6X2 564 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
HNRNPU-229ENST00000640440 NAV1Q8NEY1 1877 aa17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 RBBP6Q7Z6E9 1792 aaKnown RBP17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 FLT1P17948 1338 aa17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 A0A0G2JLL6 359 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 IGSF3O75054 1194 aa17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 PRRT2Q7Z6L0 340 aaPredicted RBP17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 MAGEB6Q8N7X4 407 aa17.56■□□□□ 0.4
HNRNPU-229ENST00000640440 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 ARHGEF6Q15052 776 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 MIGA1Q8NAN2 632 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 ARHGAP39Q9C0H5 1083 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 CPA4Q9UI42 421 aa17.55■□□□□ 0.4
HNRNPU-229ENST00000640440 RAB11FIP3O75154 756 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 ECM2O94769 699 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 MAP3K12Q12852 859 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 KIF22Q14807 665 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 C17orf99Q6UX52 265 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 DHX36Q9H2U1 1008 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-229ENST00000640440 MYH8P13535 1937 aa17.53■□□□□ 0.4
HNRNPU-229ENST00000640440 CYP2C8P10632 490 aa17.53■□□□□ 0.4
HNRNPU-229ENST00000640440 RRP1BQ14684 758 aaKnown RBP17.53■□□□□ 0.4
HNRNPU-229ENST00000640440 PALD1Q9ULE6 856 aa17.53■□□□□ 0.4
HNRNPU-229ENST00000640440 BRCA2P51587 3418 aa17.53■□□□□ 0.4
HNRNPU-229ENST00000640440 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 CAP2P40123 477 aa17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 SLC4A8Q2Y0W8 1093 aa17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 BAZ2AQ9UIF9 1905 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-229ENST00000640440 USP5P45974 858 aa17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 TTF1Q15361 905 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 CRACR2BQ8N4Y2 399 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■■■□□ 16
HNRNPU-229ENST00000640440 ARMC5Q96C12 935 aa17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 DNAJC18Q9H819 358 aa17.51■□□□□ 0.39
HNRNPU-229ENST00000640440 GOLIM4O00461 696 aa17.5■□□□□ 0.39
HNRNPU-229ENST00000640440 HLA-DOAP06340 250 aa17.5■□□□□ 0.39
HNRNPU-229ENST00000640440 CTGFP29279 349 aa17.5■□□□□ 0.39
HNRNPU-229ENST00000640440 SPP2Q13103 211 aa17.5■□□□□ 0.39
HNRNPU-229ENST00000640440 ZNF280CQ8ND82 737 aa17.5■□□□□ 0.39
HNRNPU-229ENST00000640440 MKI67P46013 3256 aaKnown RBP17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 PDE6AP16499 860 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 PSMC4P43686 418 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 SLC9C1Q4G0N8 1177 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 TMED8Q6PL24 325 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 CEP290O15078 2479 aa17.49■□□□□ 0.39
HNRNPU-229ENST00000640440 MAGEB6P1A0A0J9YX57 407 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 SMARCA5O60264 1052 aaPredicted RBP17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 GDF11O95390 407 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 GNRH1P01148 92 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 BCRP11274 1271 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 HMGCS2P54868 508 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 SHROOM1Q2M3G4 852 aaPredicted RBP17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 TREML2Q5T2D2 321 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 SLC9C2Q5TAH2 1124 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 METTL16Q86W50 562 aaKnown RBP17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 SMCR8Q8TEV9 937 aaPredicted RBP17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 TRIM47Q96LD4 638 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 LRRCC1Q9C099 1032 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
HNRNPU-229ENST00000640440 POTEFA5A3E0 1075 aa17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 ASNSP08243 561 aa17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 JAG1P78504 1218 aa17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 PROCA1Q8NCQ7 364 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-229ENST00000640440 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms