RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 TNFRSF10AO00220 468 aa14.36□□□□□ -0.11
MECP2-226ENST00000640414 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
MECP2-226ENST00000640414 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
MECP2-226ENST00000640414 PRDX5P30044 214 aa14.36□□□□□ -0.11
MECP2-226ENST00000640414 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
MECP2-226ENST00000640414 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
MECP2-226ENST00000640414 PRUNE2Q8WUY3 3088 aa14.36□□□□□ -0.11
MECP2-226ENST00000640414 LAMA2P24043 3122 aaKnown RBP14.35□□□□□ -0.11
MECP2-226ENST00000640414 ENTPD3O75355 529 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 FOSL2P15408 326 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
MECP2-226ENST00000640414 PLA2G5P39877 138 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
MECP2-226ENST00000640414 SHHQ15465 462 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 TJAP1Q5JTD0 557 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 IDI2Q9BXS1 227 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
MECP2-226ENST00000640414 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
MECP2-226ENST00000640414 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
MECP2-226ENST00000640414 DDTLA6NHG4 134 aaPredicted RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 XRCC5P13010 732 aaKnown RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 FGFR2P21802 821 aa14.34□□□□□ -0.11
MECP2-226ENST00000640414 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
MECP2-226ENST00000640414 ZSCAN29Q8IWY8 852 aaPredicted RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 ASCC2Q9H1I8 757 aaPredicted RBP14.34□□□□□ -0.11
MECP2-226ENST00000640414 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
MECP2-226ENST00000640414 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
MECP2-226ENST00000640414 PEX10O60683 326 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 BCAR3O75815 825 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 ZKSCAN1P17029 563 aaPredicted RBP14.33□□□□□ -0.12
MECP2-226ENST00000640414 SPP2Q13103 211 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 SSH1Q8WYL5 1049 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 MUC3AQ02505 3323 aa14.33□□□□□ -0.12
MECP2-226ENST00000640414 CDH23Q9H251 3354 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 IFIT1P09914 478 aaKnown RBP14.32□□□□□ -0.12
MECP2-226ENST00000640414 NBPF7P0C2Y1 421 aaPredicted RBP14.32□□□□□ -0.12
MECP2-226ENST00000640414 ATN1P54259 1190 aaPredicted RBP14.32□□□□□ -0.12
MECP2-226ENST00000640414 HMGCS2P54868 508 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.12
MECP2-226ENST00000640414 PUM3Q15397 648 aaKnown RBP14.32□□□□□ -0.12
MECP2-226ENST00000640414 CCL14Q16627 93 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 USP38Q8NB14 1042 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 KLHDC4Q8TBB5 520 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 SOCS4Q8WXH5 440 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 FAM122AQ96E09 287 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 PRKAG2Q9UGJ0 569 aa14.32□□□□□ -0.12
MECP2-226ENST00000640414 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 SMAD3P84022 425 aaKnown RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 RABL6Q3YEC7 729 aaPredicted RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 ZNF280CQ8ND82 737 aa14.31□□□□□ -0.12
MECP2-226ENST00000640414 USP6NLQ92738 828 aa14.31□□□□□ -0.12
MECP2-226ENST00000640414 BICC1Q9H694 974 aaKnown RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 DDX4Q9NQI0 724 aaKnown RBP14.31□□□□□ -0.12
MECP2-226ENST00000640414 TMEM265A0A087WTH1 108 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 FAM196BA6NMK8 535 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 RTP1P59025 263 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 ANKRD44Q8N8A2 993 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 SRCIN1Q9C0H9 1055 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 TXNRD2Q9NNW7 524 aa14.3□□□□□ -0.12
MECP2-226ENST00000640414 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 TBC1D12O60347 775 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 PICALMQ13492 652 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 SH3D19Q5HYK7 790 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 SLC4A10Q6U841 1118 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
MECP2-226ENST00000640414 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
MECP2-226ENST00000640414 UTYO14607 1347 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 GAKO14976 1311 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
MECP2-226ENST00000640414 SLC5A1P13866 664 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 RGS2P41220 211 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 MORN1Q5T089 497 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 LPIN2Q92539 896 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 BADQ92934 168 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 OSBPL5Q9H0X9 879 aaPredicted RBP14.28□□□□□ -0.12
MECP2-226ENST00000640414 SMC4Q9NTJ3 1288 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 ATP11BQ9Y2G3 1177 aa14.28□□□□□ -0.12
MECP2-226ENST00000640414 MAPK4P31152 587 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
MECP2-226ENST00000640414 IRX3P78415 501 aaPredicted RBP14.27□□□□□ -0.13
MECP2-226ENST00000640414 RRP1BQ14684 758 aaKnown RBP14.27□□□□□ -0.13
MECP2-226ENST00000640414 Q3C1V9 767 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 GPR142Q7Z601 462 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 APBA2Q99767 749 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 TBC1D2Q9BYX2 928 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 PORCNQ9H237 461 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.13
MECP2-226ENST00000640414 RBPJLQ9UBG7 517 aa14.27□□□□□ -0.13
MECP2-226ENST00000640414 RLFQ13129 1914 aa14.26□□□□□ -0.13
MECP2-226ENST00000640414 DNM1LO00429 736 aa14.26□□□□□ -0.13
MECP2-226ENST00000640414 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms