RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 CWC27Q6UX04 472 aaKnown RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 NFXL1Q6ZNB6 911 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 MFSD6Q6ZSS7 791 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 CAGE1Q8TC20 777 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 RBM27Q9P2N5 1060 aaKnown RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 POTEB2H3BUK9 544 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 SDSP20132 328 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 YY1P25490 414 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 CRKP46108 304 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 BLOC1S2Q6QNY1 142 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 GBP6Q6ZN66 633 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 SGIP1Q9BQI5 828 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 POLLQ9UGP5 575 aa6.52□□□□□ -1.37
RTTN-218ENST00000640408 HERC5Q9UII4 1024 aaKnown RBP6.52□□□□□ -1.37
RTTN-218ENST00000640408 CCDC171Q6TFL3 1326 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 RGPD3A6NKT7 1758 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 RGPD4Q7Z3J3 1758 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 B4DLN1 442 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 NPM3O75607 178 aaKnown RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 GBP2P32456 591 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 ECE1P42892 770 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 MRPL12P52815 198 aaKnown RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 MICALL2Q8IY33 904 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 SPC24Q8NBT2 197 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 CCDC102AQ96A19 550 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 TBC1D2Q9BYX2 928 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 ARHGEF10LQ9HCE6 1279 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 PI4KBQ9UBF8 816 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 MBD4O95243 580 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 IGHDP01880 384 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 VIL1P09327 827 aaKnown RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 PPP4CP60510 307 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 NOL8Q76FK4 1167 aaKnown RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 KIF5BP33176 963 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 EPHX2P34913 555 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 BTDP43251 543 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 FKBP1BP68106 108 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 FAM83AQ86UY5 434 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 FMNL3Q8IVF7 1028 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 V9GYY5 206 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 TSPY2A6NKD2 308 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 CDKL5O76039 1030 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 MCM3P25205 808 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 ADORA1P30542 326 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 ANAPC15P60006 121 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 IKQ13123 557 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 LUZP1Q86V48 1076 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 KIF18AQ8NI77 898 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 ZFP91Q96JP5 570 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 PDGFDQ9GZP0 370 aaPredicted RBP6.51□□□□□ -1.37
RTTN-218ENST00000640408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.51□□□□□ -1.37
RTTN-218ENST00000640408 ZKSCAN5Q9Y2L8 839 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 CYP46A1Q9Y6A2 500 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 LAMB4A4D0S4 1761 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 ZNF532Q9HCE3 1301 aa6.51□□□□□ -1.37
RTTN-218ENST00000640408 WNK3Q9BYP7 1800 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 A0A1B0GUA9 196 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 PPP2R5BQ15173 497 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 KRT26Q7Z3Y9 468 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 CNPY4Q8N129 248 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ZNF397Q8NF99 534 aaPredicted RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 NCOA7Q8NI08 942 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 MROH7-TTC4A0A0A0MT08 1334 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 H3BQV1 296 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 GPAA1O43292 621 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 LMAN1P49257 510 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 PTPN14Q15678 1187 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 IFFO2Q5TF58 517 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 FAM151AQ8WW52 585 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ZNF341Q9BYN7 854 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 K7ELQ4 463 aaPredicted RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 PSMD14O00487 310 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 LDHDQ86WU2 507 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 SIRT2Q8IXJ6 389 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 SMC1BQ8NDV3 1235 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 CTCFLQ8NI51 663 aaPredicted RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 C7orf43Q8WVR3 580 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 MTA3Q9BTC8 594 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 TMOD4Q9NZQ9 345 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 UNCXA6NJT0 531 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 NEMFO60524 1076 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ASNSP08243 561 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 CALM1P0DP23 149 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 CALM2P0DP24 149 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 CALM3P0DP25 149 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ADD2P35612 726 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 BICD2Q8TD16 824 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ZDHHC15Q96MV8 337 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 MPHOSPH6Q99547 160 aaKnown RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 GPRC5DQ9NZD1 345 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 SERPINB13Q9UIV8 391 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 BRWD3Q6RI45 1802 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ENOX2Q16206 610 aaKnown RBP6.5□□□□□ -1.37
RTTN-218ENST00000640408 C3orf67Q6ZVT6 689 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 TRIM22Q8IYM9 498 aa6.5□□□□□ -1.37
RTTN-218ENST00000640408 ZSCAN31Q96LW9 406 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms