RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MAN1B1Q9UKM7 699 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 SPEF2Q9C093 1822 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 WDR19Q8NEZ3 1342 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 SEC31AO94979 1220 aaKnown RBP18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 CASP1P29466 404 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 TDO2P48775 406 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 NKX1-1Q15270 411 aaPredicted RBP18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 TERF2Q15554 542 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 PLA2G12BQ9BX93 195 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 KLHL10Q6JEL2 608 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 SAMSN1Q9NSI8 373 aaKnown RBP18.98■□□□□ 0.63
HNRNPU-228ENST00000640306 GABPB1Q06547 395 aaPredicted RBP18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 POSTNQ15063 836 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 PPP2R2CQ9Y2T4 447 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 FAM205CA6NFA0 338 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 H2AFXP16104 143 aaPredicted RBP18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 GNG11P61952 73 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 KARSQ15046 597 aaKnown RBP18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 SAFBQ15424 915 aaKnown RBP eCLIP18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 SPATA5Q8NB90 893 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 WDR24Q96S15 920 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
HNRNPU-228ENST00000640306 VWA3AA6NCI4 1184 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 COBLO75128 1261 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 STX17P56962 302 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 RTN1Q16799 776 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 CPLX3Q8WVH0 158 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 CABP5Q9NP86 173 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 PATL2C9JE40 543 aaKnown RBP18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 UBAP1LF5GYI3 381 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 MMP1P03956 469 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 SGMS1Q86VZ5 419 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
HNRNPU-228ENST00000640306 FMNL1O95466 1100 aaPredicted RBP18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 AFMP43652 599 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 MTF1Q14872 753 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 AKNAD1Q5T1N1 836 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 TMEM139Q8IV31 216 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 IRX2Q9BZI1 471 aaPredicted RBP18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 ZSWIM4Q9H7M6 989 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 AKAP11Q9UKA4 1901 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 MINDY4BA8MYZ0 360 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 BCAMP50895 628 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 MDM2Q00987 491 aaPredicted RBP18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 FHOD1Q9Y613 1164 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
HNRNPU-228ENST00000640306 WTAPQ15007 396 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 TRIM22Q8IYM9 498 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 FBXO2Q9UK22 296 aaPredicted RBP18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 TOM1O60784 492 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 MAP3K12Q12852 859 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 MED15Q96RN5 788 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 POLR3GO15318 223 aaPredicted RBP18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 PRDM1O75626 825 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 KCNJ6P48051 423 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 BMS1Q14692 1282 aaKnown RBP18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 SMYD4Q8IYR2 804 aaPredicted RBP18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 STAMQ92783 540 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 DHX58Q96C10 678 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 CSRNP2Q9H175 543 aa18.94■□□□□ 0.62
HNRNPU-228ENST00000640306 PHLPP2Q6ZVD8 1323 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 PNMA6AP0CW24 399 aaPredicted RBP18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 IFNAR1P17181 557 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 ARID4AP29374 1257 aaPredicted RBP18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 LPIN2Q92539 896 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 AHDC1Q5TGY3 1603 aaPredicted RBP18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 A0A0U1RQJ8 604 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 LIFRP42702 1097 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 TC2NQ8N9U0 490 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 ATRIPQ8WXE1 791 aa18.93■□□□□ 0.62
HNRNPU-228ENST00000640306 FAM237AA0A1B0GTK4 181 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 TEX33O43247 280 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 CCP110O43303 1012 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 ZSCAN12O43309 604 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 PDE8AO60658 829 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 UQCRFS1P1P0C7P4 283 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 EPSTI1Q96J88 318 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 MPHOSPH8Q99549 860 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 VPS54Q9P1Q0 977 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 MYH7P12883 1935 aa18.92■□□□□ 0.62
HNRNPU-228ENST00000640306 PTPREP23469 700 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms