RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 HERC4Q5GLZ8 1057 aaPredicted RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 TTC38Q5R3I4 469 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 RNF187Q5TA31 235 aaPredicted RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 LIN9Q5TKA1 542 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 OTUD6AQ7L8S5 288 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 TTC14Q96N46 770 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 USP19O94966 1318 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 CTAGE9A4FU28 777 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 TYRO3Q06418 890 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 FBF1Q8TES7 1133 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 ATP8A2Q9NTI2 1148 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 ARHGEF12Q9NZN5 1544 aa11.5□□□□□ -0.57
KCNQ3-208ENST00000639496 LTKP29376 864 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 ZAP70P43403 619 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 MYL5Q02045 173 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CCDC186Q7Z3E2 898 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 DNAI1Q9UI46 699 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 TNFAIP3P21580 790 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 USH1GQ495M9 461 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 FAM47CQ5HY64 1035 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CCDC63Q8NA47 563 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 NR1I2O75469 434 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 NOC4LQ9BVI4 516 aaKnown RBP11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 NSRP1Q9H0G5 558 aaKnown RBP11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 MLXIPQ9HAP2 919 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 SLC27A2O14975 620 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 GIGYF1O75420 1035 aaPredicted RBP11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CCNA1P78396 465 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 CCDC125Q86Z20 511 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 KIAA0825Q8IV33 1275 aa11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
KCNQ3-208ENST00000639496 NEURL1BA8MQ27 555 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 PCCAP05165 728 aaPredicted RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 SEL1L2Q5TEA6 688 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 MRPL11Q9Y3B7 192 aaKnown RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 TCOF1Q13428 1488 aaKnown RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 ATP5JP18859 108 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 TNNC1P63316 161 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 BIRC2Q13490 618 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 NT5C3AQ9H0P0 336 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 DAPK3O43293 454 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 SPOPO43791 374 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 TUBBP07437 444 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 ATP7AQ04656 1500 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 USP17L12C9JPN9 530 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 USP17L21D6R901 530 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 DDX39AO00148 427 aaKnown RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 EXOC3O60645 756 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 P4HA1P13674 534 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 CALCRLQ16602 461 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 USP26Q9BXU7 913 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 ARFGAP3Q9NP61 516 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
KCNQ3-208ENST00000639496 CUTAO60888 179 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 MCF2L2Q86YR7 1114 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 HAUS7Q99871 368 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 SGSM2O43147 1006 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 GAS7O60861 476 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 PPP1R7Q15435 360 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 SUPT20HL1Q3ZLR7 823 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CFAP58Q5T655 872 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CEP128Q6ZU80 1094 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 ANKRD35Q8N283 1001 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 NSMCE1Q8WV22 266 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 ODF2LQ9ULJ1 636 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 STK10O94804 968 aaKnown RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CD19P15391 556 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 TRIM14Q14142 442 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 KRT27Q7Z3Y8 459 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 POLR3GO15318 223 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 OPA1O60313 960 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 VAV2P52735 878 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 USPL1Q5W0Q7 1092 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CSGALNACT2Q8N6G5 542 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 CCDC17Q96LX7 622 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 DSCC1Q9BVC3 393 aa11.47□□□□□ -0.57
KCNQ3-208ENST00000639496 TSGA10Q9BZW7 698 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms