RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 SCP2P22307 547 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 HLFQ16534 295 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
GFAP-228ENST00000638488 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
GFAP-228ENST00000638488 TOB2Q14106 344 aaPredicted RBP13.79□□□□□ -0.2
GFAP-228ENST00000638488 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
GFAP-228ENST00000638488 EYA2O00167 538 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 CHUKO15111 745 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 UBASH3AP57075 661 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 HAUS7Q99871 368 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 BAG1Q99933 345 aaPredicted RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 JPH2Q9BR39 696 aaPredicted RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 PAPPAQ13219 1627 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 COL15A1P39059 1388 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 PHACTR2O75167 634 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 RDXP35241 583 aaKnown RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 STK3Q13188 491 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
GFAP-228ENST00000638488 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 CLIC6Q96NY7 704 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
GFAP-228ENST00000638488 KLHL33A6NCF5 533 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.2
GFAP-228ENST00000638488 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.2
GFAP-228ENST00000638488 TAF5LO75529 589 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 SYF2O95926 243 aaKnown RBP13.77□□□□□ -0.2
GFAP-228ENST00000638488 VSNL1P62760 191 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.2
GFAP-228ENST00000638488 TEX11Q8IYF3 940 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.2
GFAP-228ENST00000638488 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 XAGE2Q96GT9 111 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 SLC4A9Q96Q91 983 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 SUGCTQ9HAC7 445 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 SNRKQ9NRH2 765 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 TBC1D2BQ9UPU7 963 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 ZNF609O15014 1411 aa13.77□□□□□ -0.2
GFAP-228ENST00000638488 LRRIQ3A6PVS8 624 aaPredicted RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 CCT5P48643 541 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
GFAP-228ENST00000638488 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 TJP1Q07157 1748 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 FSBPO95073 299 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 LMOD1P29536 600 aaPredicted RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 NF2P35240 595 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 TBX2Q13207 712 aaPredicted RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 CRYMQ14894 314 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 SPATS2Q86XZ4 545 aaKnown RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
GFAP-228ENST00000638488 CEP126Q9P2H0 1117 aa13.77□□□□□ -0.21
GFAP-228ENST00000638488 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 JAK2O60674 1132 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 ME1P48163 572 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 CEBPZQ03701 1054 aaKnown RBP13.76□□□□□ -0.21
GFAP-228ENST00000638488 WWC2Q6AWC2 1192 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 LLPHQ9BRT6 129 aaKnown RBP13.76□□□□□ -0.21
GFAP-228ENST00000638488 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 NEDD4P46934 1319 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 SERPINC1P01008 464 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 ZSWIM4Q9H7M6 989 aa13.76□□□□□ -0.21
GFAP-228ENST00000638488 MCM3P25205 808 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 ADORA1P30542 326 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 FNTAP49354 379 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
GFAP-228ENST00000638488 WHAMMP3Q1A5X7 153 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 WLSQ5T9L3 541 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 SMARCC2Q8TAQ2 1214 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 ZKSCAN4Q969J2 545 aaPredicted RBP13.75□□□□□ -0.21
GFAP-228ENST00000638488 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
GFAP-228ENST00000638488 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
GFAP-228ENST00000638488 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms