RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 FAM83AQ86UY5 434 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 TOMM22Q9NS69 142 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 DDX60LQ5H9U9 1706 aaKnown RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 NEDD4P46934 1319 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 FOCADQ5VW36 1801 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 B4E1Z4 1266 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 PFKFB2O60825 505 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 KDM4AO75164 1064 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
LINC00598-216ENST00000638163 YY1P25490 414 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 SCNN1DP51172 638 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 FOXP4Q8IVH2 680 aaPredicted RBP12.12□□□□□ -0.47
LINC00598-216ENST00000638163 BRF1Q92994 677 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
LINC00598-216ENST00000638163 SERPINB13Q9UIV8 391 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 NID2Q14112 1375 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
LINC00598-216ENST00000638163 CCDC69A6NI79 296 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 H7C1D1 291 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
LINC00598-216ENST00000638163 IFIT3O14879 490 aaKnown RBP12.11□□□□□ -0.47
LINC00598-216ENST00000638163 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 WTAPQ15007 396 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 MYOZ2Q9NPC6 264 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
LINC00598-216ENST00000638163 COL4A5P29400 1685 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 DDAH1O94760 285 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 RASSF7Q02833 373 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 RRP12Q5JTH9 1297 aaKnown RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 NFXL1Q6ZNB6 911 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 METTL16Q86W50 562 aaKnown RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 ZBED3Q96IU2 234 aaPredicted RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 ZSCAN10Q96SZ4 725 aaPredicted RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
LINC00598-216ENST00000638163 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 TAF6LQ9Y6J9 622 aa12.1□□□□□ -0.47
LINC00598-216ENST00000638163 TSPY3P0CV98 308 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 TSPY8P0CW00 308 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 PTMSP20962 102 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 ANTXR2P58335 489 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 GABPAQ06546 454 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 ME3Q16798 604 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 IFIT1BQ5T764 474 aaKnown RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 MXD3Q9BW11 206 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 DICER1Q9UPY3 1922 aaKnown RBP12.09□□□□□ -0.47
LINC00598-216ENST00000638163 TNKSO95271 1327 aa12.09□□□□□ -0.47
LINC00598-216ENST00000638163 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 GOLGA8BA8MQT2 603 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 CPLX1O14810 134 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 ZBTB43O43298 467 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 TBC1D12O60347 775 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 CPA1P15085 419 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 KIF5BP33176 963 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 DDIT3P35638 169 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 CDK8P49336 464 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
LINC00598-216ENST00000638163 GNAQP50148 359 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 PICALMQ13492 652 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 WASF1Q92558 559 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 LY9Q9HBG7 655 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
LINC00598-216ENST00000638163 ECM29Q5VYK3 1845 aa12.08□□□□□ -0.48
LINC00598-216ENST00000638163 PITPNM2Q9BZ72 1349 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms