RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 NCOA5Q9HCD5 579 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 LMBRD1Q9NUN5 540 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 RBM28Q9NW13 759 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 CFAP45Q9UL16 551 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 TTF2Q9UNY4 1162 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 MYH1P12882 1939 aa7.35□□□□□ -1.23
CACNA1D-227ENST00000637844 NID2Q14112 1375 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ROBO3Q96MS0 1386 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ECM29Q5VYK3 1845 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 STK36Q9NRP7 1315 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 GOLGA6L4A6NEF3 574 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 F8W031 263 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 PPIP5K2O43314 1243 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 FGRP09769 529 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 TSPY3P0CV98 308 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 TSPY8P0CW00 308 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 XBP1P17861 261 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 HDLBPQ00341 1268 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 AKAP17AQ02040 695 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 KIAA2012Q0VF49 1180 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 GNL2Q13823 731 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 L1TD1Q5T7N2 865 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 C12orf60Q5U649 245 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ATL3Q6DD88 541 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 HHIPL2Q6UWX4 724 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 CDC37L1Q7L3B6 337 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 SLC51AQ86UW1 340 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 MAPKAPK5Q8IW41 473 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ZNF654Q8IZM8 581 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 TMEM87AQ8NBN3 555 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 SCAND2PQ9GZW5 306 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 MTFR1LQ9H019 292 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 DBNDD1Q9H9R9 158 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 INCENPQ9NQS7 918 aa7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 GPHNQ9NQX3 736 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ORC3Q9UBD5 711 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 ISY1Q9ULR0 285 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 DDX60LQ5H9U9 1706 aaKnown RBP7.34□□□□□ -1.23
CACNA1D-227ENST00000637844 FLT1P17948 1338 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 MYO3BQ8WXR4 1341 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 CYP2D7A0A087X1C5 515 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 FIBPO43427 364 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 C21orf2O43822 256 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 PRDM1O75626 825 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 DDAH1O94760 285 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 CTDNEP1O95476 244 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 HLA-DOAP06340 250 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 USP17L8P0C7I0 530 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 DEKP35659 375 aaKnown RBP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 RBM5P52756 815 aaKnown RBP eCLIP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 UBE2HP62256 183 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 GRIK5Q16478 980 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 AOC3Q16853 763 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 OLFM4Q6UX06 510 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 USP48Q86UV5 1035 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 RAB11FIP4Q86YS3 637 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 CCDC144CPQ8IYA2 1237 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 CTCFLQ8NI51 663 aaPredicted RBP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 ALG1Q9BT22 464 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 MRIQ9BWK5 157 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 GZF1Q9H116 711 aaPredicted RBP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 KAT14Q9H8E8 782 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 PIM2Q9P1W9 311 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 HPS5Q9UPZ3 1129 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 CNPY2Q9Y2B0 182 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 DAGLAQ9Y4D2 1042 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 PSME4Q14997 1843 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 MYH8P13535 1937 aa7.33□□□□□ -1.24
CACNA1D-227ENST00000637844 GOLGA6L3A6NEY3 463 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 LETM1O95202 739 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 ZBTB7AO95365 584 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 DEXIO95424 95 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 CYP2D6P10635 497 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 DPEP1P16444 411 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 IFNAR1P17181 557 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 KIF5BP33176 963 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 CRKP46108 304 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 FOSBP53539 338 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 TFAP4Q01664 338 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 RESTQ13127 1097 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 PICALMQ13492 652 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 SEC23AQ15436 765 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 BRAPQ7Z569 592 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 DGKHQ86XP1 1220 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 ENAHQ8N8S7 591 aaPredicted RBP7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 FANCBQ8NB91 859 aa7.32□□□□□ -1.24
CACNA1D-227ENST00000637844 C7orf43Q8WVR3 580 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms