RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 PRAMEF22A3QJZ6 481 aa17.85■□□□□ 0.45
CLN5-218ENST00000637397 TNNI2P48788 182 aa17.85■□□□□ 0.45
CLN5-218ENST00000637397 POLA2Q14181 598 aa17.85■□□□□ 0.45
CLN5-218ENST00000637397 POTEJP0CG39 1038 aa17.85■□□□□ 0.45
CLN5-218ENST00000637397 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
CLN5-218ENST00000637397 WWC3Q9ULE0 1092 aa17.84■□□□□ 0.45
CLN5-218ENST00000637397 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
CLN5-218ENST00000637397 KIF1BO60333 1816 aa17.84■□□□□ 0.45
CLN5-218ENST00000637397 RNASE9P60153 205 aaKnown RBP17.84■□□□□ 0.45
CLN5-218ENST00000637397 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
CLN5-218ENST00000637397 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 UBE4AQ14139 1066 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 GOLGA6AQ9NYA3 693 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 PCDH11XQ9BZA7 1347 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 PCDH11YQ9BZA8 1340 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 TNIP1Q15025 636 aa17.83■□□□□ 0.45
CLN5-218ENST00000637397 VGLL3A8MV65 326 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 SASH1O94885 1247 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 ERCC3P19447 782 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 GNA11P29992 359 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 RESTQ13127 1097 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 CPSF1Q10570 1443 aaKnown RBP17.83■□□□□ 0.44
CLN5-218ENST00000637397 PLCD1P51178 756 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 BRD3Q15059 726 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 ARFGAP2Q8N6H7 521 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 TSGA10Q9BZW7 698 aa17.83■□□□□ 0.44
CLN5-218ENST00000637397 NDUFAB1O14561 156 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 UTP14CQ5TAP6 766 aaKnown RBP17.82■□□□□ 0.44
CLN5-218ENST00000637397 TTLL7Q6ZT98 887 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
CLN5-218ENST00000637397 GSTO1P78417 241 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 C8orf74Q6P047 294 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 CCDC121Q6ZUS5 278 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 CCDC155Q8N6L0 562 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 NELFBQ8WX92 580 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 TLDC2A0PJX2 215 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 PLCD3Q8N3E9 789 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 RRP36Q96EU6 259 aaKnown RBP17.82■□□□□ 0.44
CLN5-218ENST00000637397 TRAF5O00463 557 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
CLN5-218ENST00000637397 SEC31AO94979 1220 aaKnown RBP17.81■□□□□ 0.44
CLN5-218ENST00000637397 SLC39A14Q15043 492 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 LINC00301Q8NCQ3 95 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 LPIN2Q92539 896 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 SECISBP2LQ93073 1101 aaKnown RBP17.81■□□□□ 0.44
CLN5-218ENST00000637397 INCENPQ9NQS7 918 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 CPLX4Q7Z7G2 160 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 GOLGA6BA6NDN3 693 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 KRT13P13646 458 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 TNNC1P63316 161 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
CLN5-218ENST00000637397 SV2BQ7L1I2 683 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 SPATA5Q8NB90 893 aa17.81■□□□□ 0.44
CLN5-218ENST00000637397 HPDP32754 393 aaPredicted RBP17.8■□□□□ 0.44
CLN5-218ENST00000637397 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 MAP3K4Q9Y6R4 1608 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 PDE8AO60658 829 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 NCBP1Q09161 790 aaKnown RBP17.8■□□□□ 0.44
CLN5-218ENST00000637397 CLTCL1P53675 1640 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 ZMYM6O95789 1325 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 STX10O60499 249 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 RAPGEF1Q13905 1077 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 ZNF654Q8IZM8 581 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 POLR3EQ9NVU0 708 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 CCDC172P0C7W6 258 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 PPARDQ03181 441 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 SND1Q7KZF4 910 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLN5-218ENST00000637397 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 CCDC114Q96M63 670 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 TTC14Q96N46 770 aa17.8■□□□□ 0.44
CLN5-218ENST00000637397 NAA30Q147X3 362 aaPredicted RBP17.79■□□□□ 0.44
CLN5-218ENST00000637397 LMBR1Q8WVP7 490 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
CLN5-218ENST00000637397 SAR1BQ9Y6B6 198 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 PICALMQ13492 652 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 FBXO38Q6PIJ6 1188 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 NF2P35240 595 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 SETDB2Q96T68 719 aa17.79■□□□□ 0.44
CLN5-218ENST00000637397 F8W031 263 aaPredicted RBP17.78■□□□□ 0.44
CLN5-218ENST00000637397 HLA-DOAP06340 250 aa17.78■□□□□ 0.44
CLN5-218ENST00000637397 MAGEA1P43355 309 aa17.78■□□□□ 0.44
CLN5-218ENST00000637397 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
CLN5-218ENST00000637397 SELENOSQ9BQE4 189 aa17.78■□□□□ 0.44
CLN5-218ENST00000637397 MAST3O60307 1309 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms