RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 STK3Q13188 491 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 ZKSCAN3Q9BRR0 538 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 OSBPL5Q9H0X9 879 aaPredicted RBP24.83■■□□□ 1.56
CLN8-213ENST00000637156 SENP2Q9HC62 589 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 FAM198AQ9UFP1 575 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 BRPF3Q9ULD4 1205 aa24.83■■□□□ 1.56
CLN8-213ENST00000637156 ANGEL1Q9UNK9 670 aaKnown RBP24.83■■□□□ 1.56
CLN8-213ENST00000637156 SHTN1A0MZ66 631 aa24.82■■□□□ 1.56
CLN8-213ENST00000637156 SH2B2O14492 632 aaPredicted RBP24.82■■□□□ 1.56
CLN8-213ENST00000637156 RANBP6O60518 1105 aaKnown RBP24.82■■□□□ 1.56
CLN8-213ENST00000637156 DLGAP5Q15398 846 aa24.82■■□□□ 1.56
CLN8-213ENST00000637156 ZNF274Q96GC6 653 aaPredicted RBP24.82■■□□□ 1.56
CLN8-213ENST00000637156 PDIA3P30101 505 aaKnown RBP24.81■■□□□ 1.56
CLN8-213ENST00000637156 CWC22Q9HCG8 908 aaKnown RBP24.81■■□□□ 1.56
CLN8-213ENST00000637156 ROBO3Q96MS0 1386 aa24.81■■□□□ 1.56
CLN8-213ENST00000637156 IFIT3O14879 490 aaKnown RBP24.81■■□□□ 1.56
CLN8-213ENST00000637156 MTMR14Q8NCE2 650 aa24.81■■□□□ 1.56
CLN8-213ENST00000637156 SLC44A5Q8NCS7 719 aa24.81■■□□□ 1.56
CLN8-213ENST00000637156 LY9Q9HBG7 655 aa24.81■■□□□ 1.56
CLN8-213ENST00000637156 CDK5RAP2Q96SN8 1893 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 DTNBO60941 627 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
CLN8-213ENST00000637156 RPS12P25398 132 aaKnown RBP24.8■■□□□ 1.56
CLN8-213ENST00000637156 TCP10Q12799 353 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 TMEM67Q5HYA8 995 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 MTA3Q9BTC8 594 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 GJA3Q9Y6H8 435 aa24.8■■□□□ 1.56
CLN8-213ENST00000637156 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 PFKFB2O60825 505 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 LIFRP42702 1097 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 FAM47AQ5JRC9 791 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 C16orf86Q6ZW13 317 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 TTC6Q86TZ1 520 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 DPF2Q92785 391 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 ZBED3Q96IU2 234 aaPredicted RBP24.79■■□□□ 1.56
CLN8-213ENST00000637156 CDK8P49336 464 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 SCRN1Q12765 414 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 MKNK2Q9HBH9 465 aa24.79■■□□□ 1.56
CLN8-213ENST00000637156 GMPSP49915 693 aaPredicted RBP24.78■■□□□ 1.56
CLN8-213ENST00000637156 ZNF280AP59817 542 aaPredicted RBP24.78■■□□□ 1.56
CLN8-213ENST00000637156 GABPAQ06546 454 aa24.78■■□□□ 1.56
CLN8-213ENST00000637156 SGMS1Q86VZ5 419 aa24.78■■□□□ 1.56
CLN8-213ENST00000637156 GTF3C6Q969F1 213 aa24.78■■□□□ 1.56
CLN8-213ENST00000637156 MYOZ2Q9NPC6 264 aa24.78■■□□□ 1.56
CLN8-213ENST00000637156 CHMP5Q9NZZ3 219 aa24.78■■□□□ 1.56
CLN8-213ENST00000637156 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.78■■□□□ 1.56
CLN8-213ENST00000637156 KLF18A0A0U1RQI7 1052 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 SEC23AQ15436 765 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 SH3BP5LQ7L8J4 393 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 ZSCAN10Q96SZ4 725 aaPredicted RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 ZNF70Q9UC06 446 aaPredicted RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 HPS5Q9UPZ3 1129 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 DDTLA6NHG4 134 aaPredicted RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 WNT10BO00744 389 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 MMP14P50281 582 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 CCT2P78371 535 aaKnown RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 TFAP4Q01664 338 aa24.77■■□□□ 1.56
CLN8-213ENST00000637156 CNOT7Q9UIV1 285 aaKnown RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 NAP1L2Q9ULW6 460 aaPredicted RBP24.77■■□□□ 1.56
CLN8-213ENST00000637156 CLRN2A0PK11 232 aa24.76■■□□□ 1.55
CLN8-213ENST00000637156 EGFRP00533 1210 aa24.76■■□□□ 1.55
CLN8-213ENST00000637156 SART3Q15020 963 aaKnown RBP24.76■■□□□ 1.55
CLN8-213ENST00000637156 NBPF9Q3BBW0 867 aa24.76■■□□□ 1.55
CLN8-213ENST00000637156 ZNF444Q8N0Y2 327 aaPredicted RBP24.76■■□□□ 1.55
CLN8-213ENST00000637156 UBAC1Q9BSL1 405 aa24.76■■□□□ 1.55
CLN8-213ENST00000637156 TNKSO95271 1327 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 NAV1Q8NEY1 1877 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 TSPY2A6NKD2 308 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 NMT2O60551 498 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 ENTPD3O75355 529 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 RASA1P20936 1047 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 SPDYE2Q495Y8 402 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 IQCA1Q86XH1 822 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 ENAHQ8N8S7 591 aaPredicted RBP24.75■■□□□ 1.55
CLN8-213ENST00000637156 ZNF287Q9HBT7 754 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 SERPINB13Q9UIV8 391 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
CLN8-213ENST00000637156 FOCADQ5VW36 1801 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 SLURP2P0DP57 97 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 WTAPQ15007 396 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 MICALL2Q8IY33 904 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 TMTC2Q8N394 836 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 DHX36Q9H2U1 1008 aaKnown RBP24.75■■□□□ 1.55
CLN8-213ENST00000637156 NCOA5Q9HCD5 579 aaKnown RBP24.75■■□□□ 1.55
CLN8-213ENST00000637156 IL17RBQ9NRM6 502 aa24.75■■□□□ 1.55
CLN8-213ENST00000637156 DDX60LQ5H9U9 1706 aaKnown RBP24.74■■□□□ 1.55
CLN8-213ENST00000637156 ERICH2A1L162 156 aa24.74■■□□□ 1.55
CLN8-213ENST00000637156 NT5C2P49902 561 aa24.74■■□□□ 1.55
CLN8-213ENST00000637156 RBM26Q5T8P6 1007 aaKnown RBP24.74■■□□□ 1.55
CLN8-213ENST00000637156 LAMB1P07942 1786 aa24.74■■□□□ 1.55
CLN8-213ENST00000637156 TCP10L2B9ZVM9 353 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 PKP1Q13835 747 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 APOA5Q6Q788 366 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 NFXL1Q6ZNB6 911 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 SAMD7Q7Z3H4 446 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 RAB11FIP4Q86YS3 637 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 SMC3Q9UQE7 1217 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 MYH1P12882 1939 aa24.73■■□□□ 1.55
CLN8-213ENST00000637156 GPC2Q8N158 579 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 RNF181Q9P0P0 153 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms