RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 DNM2P50570 870 aa19.91■□□□□ 0.78
CACNA1A-227ENST00000636549 SPC25Q9HBM1 224 aa19.91■□□□□ 0.78
CACNA1A-227ENST00000636549 FAM184BQ9ULE4 1060 aa19.91■□□□□ 0.78
CACNA1A-227ENST00000636549 CAPN9O14815 690 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 SCYL1Q96KG9 808 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 CD2APQ9Y5K6 639 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 EHBP1Q8NDI1 1231 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 STAMQ92783 540 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 MRPL44Q9H9J2 332 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 USP21Q9UK80 565 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 A0A1B0GVL5 298 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 ITGA6P23229 1130 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 HIBADHP31937 336 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 SEPT6Q14141 434 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 IFNKQ9P0W0 207 aa19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 PALM3A6NDB9 673 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-227ENST00000636549 CCDC186Q7Z3E2 898 aa19.89■□□□□ 0.78
CACNA1A-227ENST00000636549 TBC1D8O95759 1140 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 TIMM10P62072 90 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 ZNF513Q8N8E2 541 aaPredicted RBP19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 ASIC2Q16515 512 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 MRPS27Q92552 414 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 ARHGEF2Q92974 986 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 SMYD2Q9NRG4 433 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 NOS1P29475 1434 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 RNF113AO15541 343 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 CALCOCO2Q13137 446 aa19.89■□□□□ 0.77
CACNA1A-227ENST00000636549 KRT81Q14533 505 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 INTS8Q75QN2 995 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 POLKQ9UBT6 870 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 UBXN2AP68543 259 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 BRD3Q15059 726 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 ALDH1L2Q3SY69 923 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 DCPSQ96C86 337 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 FBXW4P57775 412 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 ALAS1P13196 640 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 ADAT2Q7Z6V5 191 aaKnown RBP19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 KLHL7Q8IXQ5 586 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 ANKRD2Q9GZV1 360 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 IGHDP01880 384 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 PLCG2P16885 1265 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 STMN2Q93045 179 aa19.88■□□□□ 0.77
CACNA1A-227ENST00000636549 SPTLC2O15270 562 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 GNA11P29992 359 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 UBE2HP62256 183 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 KAZNQ674X7 775 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 BLZF1Q9H2G9 400 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 HP1BP3Q5SSJ5 553 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 CDAN1Q8IWY9 1227 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 MYLK4Q86YV6 388 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 BICDL2A1A5D9 508 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 RFC1P35251 1148 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 CYP2J2P51589 502 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 TRAF1Q13077 416 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 SYNDIG1Q9H7V2 258 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 DPY19L2Q6NUT2 758 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 NME8Q8N427 588 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 SH2D4AQ9H788 454 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 MTUS1Q9ULD2 1270 aa19.87■□□□□ 0.77
CACNA1A-227ENST00000636549 GTF2IP78347 998 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 SYT10Q6XYQ8 523 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 LIN9Q5TKA1 542 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 CALUO43852 315 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 CCDC87Q9NVE4 849 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 FIS1Q9Y3D6 152 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 DLGAP5Q15398 846 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 HINFPQ9BQA5 517 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 PPP1R12CQ9BZL4 782 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 CLRN2A0PK11 232 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 SLC1A4P43007 532 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 SLC12A2P55011 1212 aa19.86■□□□□ 0.77
CACNA1A-227ENST00000636549 ALDH3A1P30838 453 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 WHAMMQ8TF30 809 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 RILPQ96NA2 401 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 HMG20BQ9P0W2 317 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 MTRF1LQ9UGC7 380 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 V9GY48 417 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 NR1I2O75469 434 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 GBP7Q8N8V2 638 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 KCNG4Q8TDN1 519 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 STMN4Q9H169 189 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 NCOA5Q9HCD5 579 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 LRFN2Q9ULH4 789 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 EEPD1Q7L9B9 569 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 MTRQ99707 1265 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 BAG1Q99933 345 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 CDC26Q8NHZ8 85 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 ASIC3Q9UHC3 531 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 ABCC5O15440 1437 aa19.85■□□□□ 0.77
CACNA1A-227ENST00000636549 TTC6Q86TZ1 520 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms