RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 LRMPQ12912 555 aa16.02■□□□□ 0.15
GABRB3-219ENST00000636466 USPL1Q5W0Q7 1092 aa16.02■□□□□ 0.15
GABRB3-219ENST00000636466 CPXCR1Q8N123 301 aa16.02■□□□□ 0.15
GABRB3-219ENST00000636466 FTOQ9C0B1 505 aaKnown RBP eCLIP16.02■□□□□ 0.15
GABRB3-219ENST00000636466 TMEM110-MUSTN1A8MSY1 372 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 U2AF2P26368 475 aaKnown RBP eCLIP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 KRT86O43790 486 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 TACC1O75410 805 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 GOLGA8HP0CJ92 632 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 DESP17661 470 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 PPARDQ03181 441 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 ATP7BP35670 1465 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 PPARAQ07869 468 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 USH1GQ495M9 461 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 DNAJC21Q5F1R6 531 aaKnown RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 DPP8Q6V1X1 898 aaPredicted RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 GIGYF2Q6Y7W6 1299 aaKnown RBP16.01■□□□□ 0.15
GABRB3-219ENST00000636466 DPH6Q7L8W6 267 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 EYA3Q99504 573 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 ABCC3O15438 1527 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 CDC42BPAQ5VT25 1732 aa16.01■□□□□ 0.15
GABRB3-219ENST00000636466 PDE8BO95263 885 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 GBP2P32456 591 aaPredicted RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 PRKG1Q13976 671 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 UBE4AQ14139 1066 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 MFSD14BQ5SR56 506 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 TAB2Q9NYJ8 693 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 ARID4AP29374 1257 aaPredicted RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 KRT222Q8N1A0 295 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 AKR1B15C9JRZ8 316 aaPredicted RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 MCM3P25205 808 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 SLC1A4P43007 532 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 KIAA0753Q2KHM9 967 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 SV2BQ7L1I2 683 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 EHBP1Q8NDI1 1231 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 CUTAO60888 179 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 ATP2C2O75185 946 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 MAP2K1Q02750 393 aaPredicted RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 CHRNDQ07001 517 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 PSMB7Q99436 277 aa16■□□□□ 0.15
GABRB3-219ENST00000636466 NOC4LQ9BVI4 516 aaKnown RBP16■□□□□ 0.15
GABRB3-219ENST00000636466 MAP3K15Q6ZN16 1313 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 BACH1O14867 736 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 SCRN1Q12765 414 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 PIGBQ92521 554 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 RIOK3O14730 519 aaKnown RBP15.99■□□□□ 0.15
GABRB3-219ENST00000636466 TNKSO95271 1327 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 LARGE1O95461 756 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 HARSP12081 509 aaKnown RBP15.99■□□□□ 0.15
GABRB3-219ENST00000636466 HOOK3Q86VS8 718 aa15.99■□□□□ 0.15
GABRB3-219ENST00000636466 XPO4Q9C0E2 1151 aaKnown RBP15.99■□□□□ 0.15
GABRB3-219ENST00000636466 TBC1D5Q92609 795 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 BICDL2A1A5D9 508 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 PFKFB1P16118 471 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 SCNN1DP51172 638 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 DDX39AO00148 427 aaKnown RBP15.98■□□□□ 0.15
GABRB3-219ENST00000636466 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
GABRB3-219ENST00000636466 MTX1Q13505 466 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 PTPN21Q16825 1174 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
GABRB3-219ENST00000636466 GOLGA6L7A0A1B0GV03 622 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 POSTNQ15063 836 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 NELFCDQ8IXH7 590 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
GABRB3-219ENST00000636466 LRWD1Q9UFC0 647 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
GABRB3-219ENST00000636466 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
GABRB3-219ENST00000636466 KRT9P35527 623 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 KRT83P78385 493 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 IFT81Q8WYA0 676 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 FANCBQ8NB91 859 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 HERC4Q5GLZ8 1057 aaPredicted RBP15.97■□□□□ 0.15
GABRB3-219ENST00000636466 GPKOWQ92917 476 aaPredicted RBP eCLIP15.97■□□□□ 0.15
GABRB3-219ENST00000636466 POTEB2H3BUK9 544 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 CNGA4Q8IV77 575 aa15.97■□□□□ 0.15
GABRB3-219ENST00000636466 PCDHA7Q9UN72 937 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms