RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 RIOK1Q9BRS2 568 aaKnown RBP25.2■■□□□ 1.62
SF1-221ENST00000633899 HERC5Q9UII4 1024 aaKnown RBP25.2■■□□□ 1.62
SF1-221ENST00000633899 PALD1Q9ULE6 856 aa25.2■■□□□ 1.62
SF1-221ENST00000633899 SIPA1L1O43166 1804 aa25.2■■□□□ 1.62
SF1-221ENST00000633899 FAM196BA6NMK8 535 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 PHF20L1A8MW92 1017 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 CTNND1O60716 968 aaKnown RBP25.19■■□□□ 1.62
SF1-221ENST00000633899 SLURP2P0DP57 97 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 SNAPC2Q13487 334 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 UBE3CQ15386 1083 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 B4GALNT3Q6L9W6 998 aa25.19■■□□□ 1.62
SF1-221ENST00000633899 IRF6O14896 467 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 CETPP11597 493 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 SLC4A8Q2Y0W8 1093 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 SMC5Q8IY18 1101 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 TNS4Q8IZW8 715 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 KBTBD3Q8NAB2 608 aa25.18■■□□□ 1.62
SF1-221ENST00000633899 TBC1D8O95759 1140 aa25.17■■□□□ 1.62
SF1-221ENST00000633899 LRRFIP1Q32MZ4 808 aaKnown RBP25.17■■□□□ 1.62
SF1-221ENST00000633899 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
SF1-221ENST00000633899 LCORLQ8N3X6 602 aa25.17■■□□□ 1.62
SF1-221ENST00000633899 MS4A4AQ96JQ5 239 aa25.17■■□□□ 1.62
SF1-221ENST00000633899 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
SF1-221ENST00000633899 TESPA1A2RU30 521 aaPredicted RBP25.16■■□□□ 1.62
SF1-221ENST00000633899 IGF2BP3O00425 579 aaKnown RBP eCLIP25.16■■□□□ 1.62
SF1-221ENST00000633899 MBD4O95243 580 aa25.16■■□□□ 1.62
SF1-221ENST00000633899 IGHDP01880 384 aa25.16■■□□□ 1.62
SF1-221ENST00000633899 PI4K2BQ8TCG2 481 aa25.16■■□□□ 1.62
SF1-221ENST00000633899 ARMT1Q9H993 441 aa25.16■■□□□ 1.62
SF1-221ENST00000633899 POLR3DP05423 398 aaPredicted RBP25.15■■□□□ 1.62
SF1-221ENST00000633899 SLFNL1Q499Z3 407 aa25.15■■□□□ 1.62
SF1-221ENST00000633899 TTC6Q86TZ1 520 aa25.15■■□□□ 1.62
SF1-221ENST00000633899 BRI3BPQ8WY22 251 aa25.15■■□□□ 1.62
SF1-221ENST00000633899 ZFYP08048 801 aaPredicted RBP25.14■■□□□ 1.62
SF1-221ENST00000633899 PTPRAP18433 802 aa25.14■■□□□ 1.62
SF1-221ENST00000633899 DDRGK1Q96HY6 314 aa25.14■■□□□ 1.62
SF1-221ENST00000633899 FSD1Q9BTV5 496 aa25.14■■□□□ 1.62
SF1-221ENST00000633899 ZHX2Q9Y6X8 837 aa25.14■■□□□ 1.62
SF1-221ENST00000633899 DDX60LQ5H9U9 1706 aaKnown RBP25.14■■□□□ 1.61
SF1-221ENST00000633899 SALL3Q9BXA9 1300 aa25.13■■□□□ 1.61
SF1-221ENST00000633899 SDR42E1Q8WUS8 393 aa25.13■■□□□ 1.61
SF1-221ENST00000633899 PTPN18Q99952 460 aa25.13■■□□□ 1.61
SF1-221ENST00000633899 MCM9Q9NXL9 1143 aa25.13■■□□□ 1.61
SF1-221ENST00000633899 BAZ2AQ9UIF9 1905 aaKnown RBP25.13■■□□□ 1.61
SF1-221ENST00000633899 PHIPQ8WWQ0 1821 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 RNF113AO15541 343 aaKnown RBP25.12■■□□□ 1.61
SF1-221ENST00000633899 CHGBP05060 677 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 CAP2P40123 477 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 PDE1AP54750 535 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 CHD1LQ86WJ1 897 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 AMOTL1Q8IY63 956 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 CFHR5Q9BXR6 569 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 SERPINB13Q9UIV8 391 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 KCNH4Q9UQ05 1017 aa25.12■■□□□ 1.61
SF1-221ENST00000633899 APPBP2Q92624 585 aa25.11■■□□□ 1.61
SF1-221ENST00000633899 STAP2Q9UGK3 403 aa25.11■■□□□ 1.61
SF1-221ENST00000633899 PTPRFP10586 1907 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 MYH8P13535 1937 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 GPR25O00155 361 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 CXCL11O14625 94 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 NUCB1Q02818 461 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 TAF1CQ15572 869 aaPredicted RBP25.1■■□□□ 1.61
SF1-221ENST00000633899 METTL16Q86W50 562 aaKnown RBP25.1■■□□□ 1.61
SF1-221ENST00000633899 PUS7LQ9H0K6 701 aaKnown RBP25.1■■□□□ 1.61
SF1-221ENST00000633899 EHD4Q9H223 541 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 DCP1AQ9NPI6 582 aaPredicted RBP25.1■■□□□ 1.61
SF1-221ENST00000633899 ATP8A2Q9NTI2 1148 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 SLC4A4Q9Y6R1 1079 aa25.1■■□□□ 1.61
SF1-221ENST00000633899 ASNSP08243 561 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 CRHR2Q13324 411 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 NOM1Q5C9Z4 860 aaKnown RBP25.09■■□□□ 1.61
SF1-221ENST00000633899 FAM43AQ8N2R8 423 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 TBC1D2Q9BYX2 928 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 DNAJC18Q9H819 358 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 AS3MTQ9HBK9 375 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 ZFYVE28Q9HCC9 887 aa25.09■■□□□ 1.61
SF1-221ENST00000633899 ZCCHC17Q9NP64 241 aaKnown RBP25.09■■□□□ 1.61
SF1-221ENST00000633899 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.09■■□□□ 1.61
SF1-221ENST00000633899 TRIM75PA6NK02 468 aa25.08■■□□□ 1.61
SF1-221ENST00000633899 BTBD19C9JJ37 291 aa25.08■■□□□ 1.61
SF1-221ENST00000633899 PRKAB2O43741 272 aa25.08■■□□□ 1.61
SF1-221ENST00000633899 ZNF296Q8WUU4 475 aaPredicted RBP25.08■■□□□ 1.61
SF1-221ENST00000633899 AFG3L2Q9Y4W6 797 aa25.08■■□□□ 1.61
SF1-221ENST00000633899 USP17L5A8MUK1 530 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 FKTNO75072 461 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 GDF11O95390 407 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 RRP1BQ14684 758 aaKnown RBP25.07■■□□□ 1.6
SF1-221ENST00000633899 FASTKD5Q7L8L6 764 aaKnown RBP25.07■■□□□ 1.6
SF1-221ENST00000633899 CCDC84Q86UT8 332 aaPredicted RBP25.07■■□□□ 1.6
SF1-221ENST00000633899 EVI5LQ96CN4 794 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 R3HDMLQ9H3Y0 253 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 GINM1Q9NU53 330 aa25.07■■□□□ 1.6
SF1-221ENST00000633899 PLCD1P51178 756 aa25.06■■□□□ 1.6
SF1-221ENST00000633899 GADL1Q6ZQY3 521 aa25.06■■□□□ 1.6
SF1-221ENST00000633899 ANKRD23Q86SG2 305 aa25.06■■□□□ 1.6
SF1-221ENST00000633899 A0A0G2JLL6 359 aaPredicted RBP25.05■■□□□ 1.6
SF1-221ENST00000633899 DGKZQ13574 1117 aa25.05■■□□□ 1.6
SF1-221ENST00000633899 PRRT2Q7Z6L0 340 aaPredicted RBP25.05■■□□□ 1.6
SF1-221ENST00000633899 ZNF280CQ8ND82 737 aa25.05■■□□□ 1.6
SF1-221ENST00000633899 OSBP2Q969R2 916 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms