RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIMS4-204ENST00000632897 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
LIMS4-204ENST00000632897 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 C2CD5Q86YS7 1000 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
LIMS4-204ENST00000632897 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 ROBO3Q96MS0 1386 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 H0YIN7 160 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 DPEP1P16444 411 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 PPP2R5BQ15173 497 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 SEC23AQ15436 765 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 MFSD14BQ5SR56 506 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 IQCA1Q86XH1 822 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 RTFDC1Q9BY42 306 aaPredicted RBP16.61■□□□□ 0.25
LIMS4-204ENST00000632897 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
LIMS4-204ENST00000632897 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
LIMS4-204ENST00000632897 DLEC1Q9Y238 1755 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 GAKO14976 1311 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 CCDC196A0A1B0GTZ2 297 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 USP5P45974 858 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 PDE4BQ07343 736 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 DIXDC1Q155Q3 683 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 GRIK5Q16478 980 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
LIMS4-204ENST00000632897 SH3RF3Q8TEJ3 882 aaPredicted RBP16.6■□□□□ 0.25
LIMS4-204ENST00000632897 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
LIMS4-204ENST00000632897 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
LIMS4-204ENST00000632897 TNKSO95271 1327 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
LIMS4-204ENST00000632897 NTRK3Q16288 839 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 RTN1Q16799 776 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
LIMS4-204ENST00000632897 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
LIMS4-204ENST00000632897 GRPEL1Q9HAV7 217 aa16.59■□□□□ 0.25
LIMS4-204ENST00000632897 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
LIMS4-204ENST00000632897 RANBP6O60518 1105 aaKnown RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 LETM1O95202 739 aaPredicted RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 IFNAR1P17181 557 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 CDC27P30260 824 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 BTDP43251 543 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 CCDC183Q5T5S1 534 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 C12orf60Q5U649 245 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 ZNF654Q8IZM8 581 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 ZNF526Q8TF50 670 aaPredicted RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
LIMS4-204ENST00000632897 WASF1Q92558 559 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
LIMS4-204ENST00000632897 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-204ENST00000632897 CALM1P0DP23 149 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 CALM2P0DP24 149 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 CALM3P0DP25 149 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 FOSBP53539 338 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 GTF2IP78347 998 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
LIMS4-204ENST00000632897 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 BRAPQ7Z569 592 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 GAS2L3Q86XJ1 694 aa16.57■□□□□ 0.24
LIMS4-204ENST00000632897 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-204ENST00000632897 DDAH1O94760 285 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 CYP2D6P10635 497 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 RXRAP19793 462 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
LIMS4-204ENST00000632897 CC2D2BQ6DHV5 1058 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 CATIPQ7Z7H3 387 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 ALG1Q9BT22 464 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
LIMS4-204ENST00000632897 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
LIMS4-204ENST00000632897 SMIM22K7EJ46 135 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
LIMS4-204ENST00000632897 TEX11Q8IYF3 940 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 FANCBQ8NB91 859 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 TGFBRAP1Q8WUH2 860 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 RBM28Q9NW13 759 aaKnown RBP16.55■□□□□ 0.24
LIMS4-204ENST00000632897 TFIP11Q9UBB9 837 aaKnown RBP16.55■□□□□ 0.24
LIMS4-204ENST00000632897 ECM29Q5VYK3 1845 aa16.55■□□□□ 0.24
LIMS4-204ENST00000632897 G3V3G9 751 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms