RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 PPP4CP60510 307 aa22.44■■□□□ 1.18
PNKP-224ENST00000631020 DYNLL1P63167 89 aaKnown RBP22.44■■□□□ 1.18
PNKP-224ENST00000631020 TCP10Q12799 353 aa22.44■■□□□ 1.18
PNKP-224ENST00000631020 TICAM2Q86XR7 235 aa22.44■■□□□ 1.18
PNKP-224ENST00000631020 OSBP2Q969R2 916 aa22.44■■□□□ 1.18
PNKP-224ENST00000631020 PUS7LQ9H0K6 701 aaKnown RBP22.44■■□□□ 1.18
PNKP-224ENST00000631020 NPM3O75607 178 aaKnown RBP22.43■■□□□ 1.18
PNKP-224ENST00000631020 LRRFIP1Q32MZ4 808 aaKnown RBP22.43■■□□□ 1.18
PNKP-224ENST00000631020 ZMYM1Q5SVZ6 1142 aa22.43■■□□□ 1.18
PNKP-224ENST00000631020 APPBP2Q92624 585 aa22.43■■□□□ 1.18
PNKP-224ENST00000631020 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
PNKP-224ENST00000631020 PTPN18Q99952 460 aa22.43■■□□□ 1.18
PNKP-224ENST00000631020 RIOK1Q9BRS2 568 aaKnown RBP22.43■■□□□ 1.18
PNKP-224ENST00000631020 CNKSR2Q8WXI2 1034 aa22.42■■□□□ 1.18
PNKP-224ENST00000631020 ZKSCAN4Q969J2 545 aaPredicted RBP22.42■■□□□ 1.18
PNKP-224ENST00000631020 OTUD5Q96G74 571 aa22.42■■□□□ 1.18
PNKP-224ENST00000631020 FAM227BQ96M60 508 aa22.42■■□□□ 1.18
PNKP-224ENST00000631020 R3HDMLQ9H3Y0 253 aa22.42■■□□□ 1.18
PNKP-224ENST00000631020 ATRNL1Q5VV63 1379 aa22.42■■□□□ 1.18
PNKP-224ENST00000631020 WDHD1O75717 1129 aaPredicted RBP22.41■■□□□ 1.18
PNKP-224ENST00000631020 PPATQ06203 517 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 PPIL2Q13356 520 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 MIGA2Q7L4E1 593 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 SH3RF3Q8TEJ3 882 aaPredicted RBP22.41■■□□□ 1.18
PNKP-224ENST00000631020 ZCCHC17Q9NP64 241 aaKnown RBP22.41■■□□□ 1.18
PNKP-224ENST00000631020 MAGEB6P1A0A0J9YX57 407 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 BAG3O95817 575 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 NMIQ13287 307 aaPredicted RBP22.41■■□□□ 1.18
PNKP-224ENST00000631020 NOL9Q5SY16 702 aaKnown RBP22.41■■□□□ 1.18
PNKP-224ENST00000631020 BRI3BPQ8WY22 251 aa22.41■■□□□ 1.18
PNKP-224ENST00000631020 CCL15-CCL14A0A0B4J2E2 113 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 A0A0D9SFI3 127 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 M0R2C6 588 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 CETPP11597 493 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 CHMLP26374 656 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 RGS19P49795 217 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 MAP3K10Q02779 954 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 CCL15Q16663 113 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 LCORLQ8N3X6 602 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 ARMT1Q9H993 441 aa22.4■■□□□ 1.18
PNKP-224ENST00000631020 COL2A1P02458 1487 aaPredicted RBP22.4■■□□□ 1.18
PNKP-224ENST00000631020 MBD4O95243 580 aa22.39■■□□□ 1.17
PNKP-224ENST00000631020 CRHR2Q13324 411 aa22.39■■□□□ 1.17
PNKP-224ENST00000631020 SNAPC2Q13487 334 aa22.39■■□□□ 1.17
PNKP-224ENST00000631020 ZFPM1Q8IX07 1006 aa22.39■■□□□ 1.17
PNKP-224ENST00000631020 NOL10Q9BSC4 688 aaKnown RBP22.39■■□□□ 1.17
PNKP-224ENST00000631020 IRF6O14896 467 aa22.38■■□□□ 1.17
PNKP-224ENST00000631020 INPP5BP32019 993 aa22.38■■□□□ 1.17
PNKP-224ENST00000631020 HELLSQ9NRZ9 838 aa22.38■■□□□ 1.17
PNKP-224ENST00000631020 DIAPH3Q9NSV4 1193 aa22.38■■□□□ 1.17
PNKP-224ENST00000631020 HIP1O00291 1037 aa22.37■■□□□ 1.17
PNKP-224ENST00000631020 CWC27Q6UX04 472 aaKnown RBP22.37■■□□□ 1.17
PNKP-224ENST00000631020 CCDC129Q6ZRS4 1044 aa22.37■■□□□ 1.17
PNKP-224ENST00000631020 STRBPQ96SI9 672 aaKnown RBP22.37■■□□□ 1.17
PNKP-224ENST00000631020 IL25Q9H293 177 aa22.37■■□□□ 1.17
PNKP-224ENST00000631020 PLCG2P16885 1265 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 FBXO46Q6PJ61 603 aaPredicted RBP22.36■■□□□ 1.17
PNKP-224ENST00000631020 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 TEX11Q8IYF3 940 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 ERO1AQ96HE7 468 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 DDX4Q9NQI0 724 aaKnown RBP22.36■■□□□ 1.17
PNKP-224ENST00000631020 KCNH4Q9UQ05 1017 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 PHF20L1A8MW92 1017 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 GPAA1O43292 621 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 PRKAB2O43741 272 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 MCMDC2Q4G0Z9 681 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
PNKP-224ENST00000631020 ZFYVE28Q9HCC9 887 aa22.36■■□□□ 1.17
PNKP-224ENST00000631020 DDTLA6NHG4 134 aaPredicted RBP22.35■■□□□ 1.17
PNKP-224ENST00000631020 TBC1D12O60347 775 aa22.35■■□□□ 1.17
PNKP-224ENST00000631020 TAF1CQ15572 869 aaPredicted RBP22.35■■□□□ 1.17
PNKP-224ENST00000631020 ZNF589Q86UQ0 364 aaPredicted RBP22.35■■□□□ 1.17
PNKP-224ENST00000631020 CERS3Q8IU89 383 aa22.35■■□□□ 1.17
PNKP-224ENST00000631020 FAM43AQ8N2R8 423 aa22.35■■□□□ 1.17
PNKP-224ENST00000631020 TGFBRAP1Q8WUH2 860 aa22.35■■□□□ 1.17
PNKP-224ENST00000631020 HPS5Q9UPZ3 1129 aa22.35■■□□□ 1.17
PNKP-224ENST00000631020 SP3Q02447 781 aa22.34■■□□□ 1.17
PNKP-224ENST00000631020 PICALMQ13492 652 aa22.34■■□□□ 1.17
PNKP-224ENST00000631020 DOCK1Q14185 1865 aa22.34■■□□□ 1.17
PNKP-224ENST00000631020 FOCADQ5VW36 1801 aa22.34■■□□□ 1.17
PNKP-224ENST00000631020 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.17
PNKP-224ENST00000631020 CRNKL1Q9BZJ0 848 aaKnown RBP22.33■■□□□ 1.17
PNKP-224ENST00000631020 CXCL11O14625 94 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 FOXP2O15409 715 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 CDC45O75419 566 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 MAPKAPK5Q8IW41 473 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 SCYL3Q8IZE3 742 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
PNKP-224ENST00000631020 GSG1L2A8MUP6 293 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 BTBD19C9JJ37 291 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 CTNND1O60716 968 aaKnown RBP22.31■■□□□ 1.16
PNKP-224ENST00000631020 VPS53Q5VIR6 699 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 OTOP1Q7RTM1 612 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 OSBPL5Q9H0X9 879 aaPredicted RBP22.31■■□□□ 1.16
PNKP-224ENST00000631020 SLC4A4Q9Y6R1 1079 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 FLT1P17948 1338 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 ANKRD23Q86SG2 305 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 PICK1Q9NRD5 415 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 TRIM17Q9Y577 477 aa22.31■■□□□ 1.16
PNKP-224ENST00000631020 CCDC171Q6TFL3 1326 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms