RNA–Protein interactions for RNA: ENST00000629999.2

DDX49-214, Transcript of DEAD-box helicase 49, humanhuman

TSL 5 BASIC

Gene DDX49, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-214ENST00000629999 MICU3Q86XE3 530 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 NSUN7Q8NE18 718 aaKnown RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 DYNLL2Q96FJ2 89 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 HPS5Q9UPZ3 1129 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 PTPDC1A2A3K4 754 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 VPS37CA5D8V6 355 aaPredicted RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX49-214ENST00000629999 PDE4BQ07343 736 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 WTAPQ15007 396 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 LARP1BQ659C4 914 aaKnown RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
DDX49-214ENST00000629999 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX49-214ENST00000629999 PCDHAC2Q9Y5I4 1007 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 CD2APQ9Y5K6 639 aa17.25■□□□□ 0.35
DDX49-214ENST00000629999 COL4A5P29400 1685 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
DDX49-214ENST00000629999 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 RAD17O75943 681 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
DDX49-214ENST00000629999 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
DDX49-214ENST00000629999 APOA5Q6Q788 366 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 CCDC144CPQ8IYA2 1237 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 USP40Q9NVE5 1235 aa17.24■□□□□ 0.35
DDX49-214ENST00000629999 FGRP09769 529 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 METAP2P50579 478 aaKnown RBP eCLIP17.23■□□□□ 0.35
DDX49-214ENST00000629999 PLCD1P51178 756 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 FOSBP53539 338 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 FAM47AQ5JRC9 791 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 LLPHQ9BRT6 129 aaKnown RBP17.23■□□□□ 0.35
DDX49-214ENST00000629999 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 TNKSO95271 1327 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 LIFRP42702 1097 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
DDX49-214ENST00000629999 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 APOBEC3HQ6NTF7 200 aaKnown RBP17.23■□□□□ 0.35
DDX49-214ENST00000629999 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
DDX49-214ENST00000629999 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
DDX49-214ENST00000629999 DDX11L8A8MPP1 907 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 CPLX1O14810 134 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 ZBTB43O43298 467 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 ORC4O43929 436 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
DDX49-214ENST00000629999 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
DDX49-214ENST00000629999 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 SLC44A5Q8NCS7 719 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
DDX49-214ENST00000629999 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 MTMR6Q9Y217 621 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
DDX49-214ENST00000629999 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 PDCP20941 246 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 ZMYND15Q9H091 742 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 DDX60LQ5H9U9 1706 aaKnown RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 PSMD14O00487 310 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 DHX16O60231 1041 aaKnown RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 NMT2O60551 498 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 F13A1P00488 732 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 CDC37L1Q7L3B6 337 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
DDX49-214ENST00000629999 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 ZDHHC15Q96MV8 337 aa17.21■□□□□ 0.35
DDX49-214ENST00000629999 CACNB3P54284 484 aa17.2■□□□□ 0.34
DDX49-214ENST00000629999 SEC23AQ15436 765 aa17.2■□□□□ 0.34
DDX49-214ENST00000629999 MTA3Q9BTC8 594 aa17.2■□□□□ 0.34
DDX49-214ENST00000629999 FOCADQ5VW36 1801 aa17.2■□□□□ 0.34
DDX49-214ENST00000629999 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 CDC27P30260 824 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 ADD1P35611 737 aaKnown RBP17.19■□□□□ 0.34
DDX49-214ENST00000629999 IFIT1BQ5T764 474 aaKnown RBP17.19■□□□□ 0.34
DDX49-214ENST00000629999 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
DDX49-214ENST00000629999 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 MYH1P12882 1939 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 NFKBIEO00221 500 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 TFAP4Q01664 338 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 NFIAQ12857 509 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
DDX49-214ENST00000629999 SERPINA10Q9UK55 444 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms