RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
PFDN5-220ENST00000628881 NEFLP07196 543 aa16.46■□□□□ 0.23
PFDN5-220ENST00000628881 SREBF2Q12772 1141 aa16.46■□□□□ 0.23
PFDN5-220ENST00000628881 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.23
PFDN5-220ENST00000628881 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
PFDN5-220ENST00000628881 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.23
PFDN5-220ENST00000628881 MANSC4A6NHS7 340 aaPredicted RBP16.45■□□□□ 0.22
PFDN5-220ENST00000628881 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 CA12O43570 354 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
PFDN5-220ENST00000628881 PDE4AP27815 886 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
PFDN5-220ENST00000628881 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 DCP1AQ9NPI6 582 aaPredicted RBP16.45■□□□□ 0.22
PFDN5-220ENST00000628881 ATP8A2Q9NTI2 1148 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 DOCK1Q14185 1865 aa16.45■□□□□ 0.22
PFDN5-220ENST00000628881 FOXN1O15353 648 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 PRKAB2O43741 272 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 TM4SF4P48230 202 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 PPATQ06203 517 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 SLC4A8Q2Y0W8 1093 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 TTC6Q86TZ1 520 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 CRACR2BQ8N4Y2 399 aaPredicted RBP16.44■□□□□ 0.22
PFDN5-220ENST00000628881 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
PFDN5-220ENST00000628881 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 EHD4Q9H223 541 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
PFDN5-220ENST00000628881 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 GPAA1O43292 621 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
PFDN5-220ENST00000628881 CTCFP49711 727 aaPredicted RBP16.43■□□□□ 0.22
PFDN5-220ENST00000628881 INHBEP58166 350 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 PPIL2Q13356 520 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 SAGE1Q9NXZ1 904 aa16.43■□□□□ 0.22
PFDN5-220ENST00000628881 ATAD5Q96QE3 1844 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 M0R2C6 588 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 GTF2A2P52657 109 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
PFDN5-220ENST00000628881 DDRGK1Q96HY6 314 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 SERPINB13Q9UIV8 391 aa16.42■□□□□ 0.22
PFDN5-220ENST00000628881 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
PFDN5-220ENST00000628881 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
PFDN5-220ENST00000628881 IRF6O14896 467 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
PFDN5-220ENST00000628881 PTPRAP18433 802 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 GNAT2P19087 354 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 CAP2P40123 477 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 PLCD1P51178 756 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
PFDN5-220ENST00000628881 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
PFDN5-220ENST00000628881 RNF186Q9NXI6 227 aa16.41■□□□□ 0.22
PFDN5-220ENST00000628881 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 AMOTL1Q8IY63 956 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
PFDN5-220ENST00000628881 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 TRPA1O75762 1119 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 GABPAQ06546 454 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 CCL15Q16663 113 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
PFDN5-220ENST00000628881 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
PFDN5-220ENST00000628881 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 USP17L21D6R901 530 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
PFDN5-220ENST00000628881 CXCL11O14625 94 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 ALDH1A1P00352 501 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 ASNSP08243 561 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 CYP2D6P10635 497 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 CETPP11597 493 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 SHMT1P34896 483 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 EVX2Q03828 476 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 CCDC136Q96JN2 1154 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 PTPN18Q99952 460 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.38■□□□□ 0.21
PFDN5-220ENST00000628881 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
PFDN5-220ENST00000628881 A0A0D9SFI3 127 aa16.37■□□□□ 0.21
PFDN5-220ENST00000628881 PATL2C9JE40 543 aaKnown RBP16.37■□□□□ 0.21
PFDN5-220ENST00000628881 GDF11O95390 407 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms