RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
SOX2-OT-249ENST00000628810 SIPA1L1O43166 1804 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 PRKAB2O43741 272 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 CACNB3P54284 484 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 ALX1Q15699 326 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 C8orf34Q49A92 452 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 TGFBRAP1Q8WUH2 860 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 DSCC1Q9BVC3 393 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 VEZTQ9HBM0 779 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
SOX2-OT-249ENST00000628810 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 USP5P45974 858 aa11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 TNNI2P48788 182 aa11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 LSG1Q9H089 658 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
SOX2-OT-249ENST00000628810 PAPPA2Q9BXP8 1791 aa11.77□□□□□ -0.52
SOX2-OT-249ENST00000628810 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 PICALMQ13492 652 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 RASA3Q14644 834 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 SBK1Q52WX2 424 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 IFNL3Q8IZI9 196 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 NACAP1Q9BZK3 213 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 DHX36Q9H2U1 1008 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 MYH1P12882 1939 aa11.77□□□□□ -0.53
SOX2-OT-249ENST00000628810 TCP10Q12799 353 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 KRT26Q7Z3Y9 468 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 METTL16Q86W50 562 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 EHD4Q9H223 541 aa11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-249ENST00000628810 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 REC8O95072 547 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 FGAP02671 866 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 MAP3K10Q02779 954 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 PTH1RQ03431 593 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 NAPBQ9H115 298 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 ANO2Q9NQ90 1003 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 ANAPC4Q9UJX5 808 aa11.75□□□□□ -0.53
SOX2-OT-249ENST00000628810 DDTLA6NHG4 134 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 ST18O60284 1047 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 TOMM70O94826 608 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 TDO2P48775 406 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 GABPAQ06546 454 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 MAP1SQ66K74 1059 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 TTC6Q86TZ1 520 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 CSRNP1Q96S65 589 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 GLIS2Q9BZE0 524 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 PALD1Q9ULE6 856 aa11.74□□□□□ -0.53
SOX2-OT-249ENST00000628810 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 USP17L21D6R901 530 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 TBC1D12O60347 775 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 ITGBL1O95965 494 aaPredicted RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 APPP05067 770 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 PPARAQ07869 468 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 HOOK2Q96ED9 719 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 HERC5Q9UII4 1024 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 RBM8AQ9Y5S9 174 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-249ENST00000628810 FGRP09769 529 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 CYP2D6P10635 497 aa11.72□□□□□ -0.53
SOX2-OT-249ENST00000628810 PLCD1P51178 756 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms