RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 TRIM43Q96BQ3 446 aaPredicted RBP9.18□□□□□ -0.94
TCF4-266ENST00000628689 HOOK2Q96ED9 719 aa9.18□□□□□ -0.94
TCF4-266ENST00000628689 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
TCF4-266ENST00000628689 ANKRD2Q9GZV1 360 aa9.18□□□□□ -0.94
TCF4-266ENST00000628689 NUDCQ9Y266 331 aa9.18□□□□□ -0.94
TCF4-266ENST00000628689 A0A0G2JLL6 359 aaPredicted RBP9.17□□□□□ -0.94
TCF4-266ENST00000628689 ITGB8P26012 769 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 PBX2P40425 430 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 CRKP46108 304 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 KCNJ4P48050 445 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 CTSWP56202 376 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 PRRT2Q7Z6L0 340 aaPredicted RBP9.17□□□□□ -0.94
TCF4-266ENST00000628689 CD320Q9NPF0 282 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 PDLIM7Q9NR12 457 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 USP34Q70CQ2 3546 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 CHD7Q9P2D1 2997 aa9.17□□□□□ -0.94
TCF4-266ENST00000628689 FAM186AA6NE01 2351 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 PTPRFP10586 1907 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 ERC2O15083 957 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 CNGB1Q14028 1251 aaPredicted RBP9.16□□□□□ -0.94
TCF4-266ENST00000628689 NOL9Q5SY16 702 aaKnown RBP9.16□□□□□ -0.94
TCF4-266ENST00000628689 C15orf52Q6ZUT6 534 aaKnown RBP9.16□□□□□ -0.94
TCF4-266ENST00000628689 FAM83AQ86UY5 434 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 PBX4Q9BYU1 374 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 DAGLAQ9Y4D2 1042 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 FRMPD3Q5JV73 1810 aa9.16□□□□□ -0.94
TCF4-266ENST00000628689 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.94
TCF4-266ENST00000628689 IGHMBP2P38935 993 aaKnown RBP9.15□□□□□ -0.94
TCF4-266ENST00000628689 CHRNDQ07001 517 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 KRT24Q2M2I5 525 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 TRIM60Q495X7 471 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 MFSD14BQ5SR56 506 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 SLC39A5Q6ZMH5 540 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 CCDC191Q8NCU4 936 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 MYD88Q99836 296 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 KCNH6Q9H252 994 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.94
TCF4-266ENST00000628689 TAF5LO75529 589 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 GRIK5Q16478 980 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 FKBP1CQ5VVH2 108 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 ZNF804AQ7Z570 1209 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
TCF4-266ENST00000628689 CWC25Q9NXE8 425 aaPredicted RBP9.14□□□□□ -0.95
TCF4-266ENST00000628689 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 AFG3L2Q9Y4W6 797 aa9.14□□□□□ -0.95
TCF4-266ENST00000628689 MYH3P11055 1940 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 RPAP1Q9BWH6 1393 aaPredicted RBP9.13□□□□□ -0.95
TCF4-266ENST00000628689 DNM1LO00429 736 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 KRT37O76014 449 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 HSPA5P11021 654 aaKnown RBP9.13□□□□□ -0.95
TCF4-266ENST00000628689 ZKSCAN1P17029 563 aaPredicted RBP9.13□□□□□ -0.95
TCF4-266ENST00000628689 SKIV2LQ15477 1246 aaKnown RBP9.13□□□□□ -0.95
TCF4-266ENST00000628689 CCL14Q16627 93 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 CCDC129Q6ZRS4 1044 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 MICALL1Q8N3F8 863 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 DBF4Q9UBU7 674 aaPredicted RBP9.13□□□□□ -0.95
TCF4-266ENST00000628689 AGTPBP1Q9UPW5 1226 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 ATRXP46100 2492 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 LRRC37A2A6NM11 1700 aa9.13□□□□□ -0.95
TCF4-266ENST00000628689 PTPRAP18433 802 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 GCLCP48506 637 aaPredicted RBP9.12□□□□□ -0.95
TCF4-266ENST00000628689 SNX17Q15036 470 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 TREML2Q5T2D2 321 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 GJC2Q5T442 439 aaPredicted RBP9.12□□□□□ -0.95
TCF4-266ENST00000628689 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
TCF4-266ENST00000628689 HERVK_113Q902F9 699 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 LPAR1Q92633 364 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 TMOD2Q9NZR1 351 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
TCF4-266ENST00000628689 HDLBPQ00341 1268 aaKnown RBP9.11□□□□□ -0.95
TCF4-266ENST00000628689 TLE2Q04725 743 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 FPGSQ05932 587 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 APOBEC3HQ6NTF7 200 aaKnown RBP9.11□□□□□ -0.95
TCF4-266ENST00000628689 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
TCF4-266ENST00000628689 ANKS1AQ92625 1134 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 USP6NLQ92738 828 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 BABAM1Q9NWV8 329 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 DDX20Q9UHI6 824 aaKnown RBP9.11□□□□□ -0.95
TCF4-266ENST00000628689 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 TACC3Q9Y6A5 838 aa9.11□□□□□ -0.95
TCF4-266ENST00000628689 PHF20L1A8MW92 1017 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 PEX10O60683 326 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 ITGA6P23229 1130 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 FAM151AQ8WW52 585 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 SOCS4Q8WXH5 440 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 ZDHHC15Q96MV8 337 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 PLEKHF1Q96S99 279 aa9.1□□□□□ -0.95
TCF4-266ENST00000628689 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.1□□□□□ -0.95
TCF4-266ENST00000628689 COG5Q9UP83 839 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms