RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 APBB1IPQ7Z5R6 666 aaPredicted RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 SRGAP1Q7Z6B7 1085 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TMEM110Q86TL2 294 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 FAM228AQ86W67 206 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 DZIP1Q86YF9 867 aaKnown RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 ANKRD13BQ86YJ7 626 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SLF2Q8IX21 1173 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CEP57L1Q8IYX8 460 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SYCP3Q8IZU3 236 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 FUKQ8N0W3 1084 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 LRRC43Q8N309 656 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 FNBP4Q8N3X1 1017 aaPredicted RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 IGSF22Q8N9C0 903 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 KLHDC4Q8TBB5 520 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ANKRD24Q8TF21 1146 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 NSMCE1Q8WV22 266 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TEKT4Q8WW24 435 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 MAIP1Q8WWC4 291 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 FOXD4L4Q8WXT5 416 aaPredicted RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 RSPH1Q8WYR4 309 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 RUBCNQ92622 972 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 PPP2R3CQ969Q6 453 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SLC35B4Q969S0 331 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 OPTNQ96CV9 577 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TBC1D31Q96DN5 1066 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TRIM11Q96F44 468 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CHAMP1Q96JM3 812 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 PRAM1Q96QH2 718 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SMC6Q96SB8 1091 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 MTRQ99707 1265 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SH3GL1Q99961 368 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 BPIFA3Q9BQP9 254 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CORO1BQ9BR76 489 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.16□□□□□ -2.06
TCF4-264ENST00000628391 TCHPQ9BT92 498 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 OSBPL1AQ9BXW6 950 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 MAK16Q9BXY0 300 aaKnown RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 CAPS2Q9BXY5 557 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 LRRCC1Q9C099 1032 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 BRD8Q9H0E9 1235 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TNMDQ9H2S6 317 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CENPHQ9H3R5 247 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 GOLPH3LQ9H4A5 285 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 RETREG1Q9H6L5 497 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 KAT14Q9H8E8 782 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ANKZF1Q9H8Y5 726 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 SENP2Q9HC62 589 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 GDPD2Q9HCC8 539 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 GPCPD1Q9NPB8 672 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 RRP7BPQ9NSQ0 103 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 NOP53Q9NZM5 478 aaKnown RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 TBC1D7Q9P0N9 293 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 WDR35Q9P2L0 1181 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ATXN10Q9UBB4 475 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 HDAC6Q9UBN7 1215 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CTNNAL1Q9UBT7 734 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 BIN2Q9UBW5 565 aaPredicted RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 TUBGCP4Q9UGJ1 667 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 PAIP2BQ9ULR5 123 aaKnown RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 HPCAL4Q9UM19 191 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.16□□□□□ -2.06
TCF4-264ENST00000628391 MAPK8IP1Q9UQF2 711 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 TNNQ9UQP3 1299 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 DAAM1Q9Y4D1 1078 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ASB3Q9Y575 518 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ADGRB3O60242 1522 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 GPATCH8Q9UKJ3 1502 aaKnown RBP2.16□□□□□ -2.06
TCF4-264ENST00000628391 OVOS2A0A0G2JMS6 1433 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 OVOS2A0A0J9YW53 1432 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 BCL9O00512 1426 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 OVOS2Q6IE36 1432 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 ASXL2Q76L83 1435 aa2.16□□□□□ -2.06
TCF4-264ENST00000628391 CDC42BPGQ6DT37 1551 aa2.15□□□□□ -2.06
TCF4-264ENST00000628391 TARSL2A2RTX5 802 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 VWA3AA6NCI4 1184 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PALM3A6NDB9 673 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 GOLGA6L4A6NEF3 574 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CFAP73A6NFT4 308 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 LRRC10BA6NIK2 292 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 LRRIQ3A6PVS8 624 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 N4BP3O15049 544 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 ARHGAP6O43182 974 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PRC1O43663 620 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 STX6O43752 255 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 EVI5O60447 810 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 CUTAO60888 179 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PHACTR2O75167 634 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 HMMRO75330 724 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 WDHD1O75717 1129 aaPredicted RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 CAPN15O75808 1086 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 TRIM37O94972 964 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 MBD4O95243 580 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 SYF2O95926 243 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 GSTA1P08263 222 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 MMEP08473 750 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 RPSAP08865 295 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 GSTA2P09210 222 aa2.15□□□□□ -2.07
TCF4-264ENST00000628391 PARP1P09874 1014 aaKnown RBP2.15□□□□□ -2.07
TCF4-264ENST00000628391 CCDC159P0C7I6 412 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms