RNA–Protein interactions for RNA: ENST00000626802.2

SOX2-OT-240, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 737 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-240ENST00000626802 POLA2Q14181 598 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 TNNI3KQ59H18 835 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 HABP4Q5JVS0 413 aaKnown RBP14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 FPGT-TNNI3KV9GXZ4 949 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
SOX2-OT-240ENST00000626802 RLBP1P12271 317 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 FCGRTP55899 365 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 GSTO1P78417 241 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 AATFQ9NY61 560 aaKnown RBP eCLIP14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 TLR7Q9NYK1 1049 aaKnown RBP14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
SOX2-OT-240ENST00000626802 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 LDHCP07864 332 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 UQCRFS1P1P0C7P4 283 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 CCL5P13501 91 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 ELNP15502 786 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 HOXD10P28358 340 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 HNRNPUQ00839 825 aaKnown RBP eCLIP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
SOX2-OT-240ENST00000626802 CYP2E1P05181 493 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 SPP2Q13103 211 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 NAA16Q6N069 864 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 MAPKAPK5Q8IW41 473 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 SSH3Q8TE77 659 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 DNAJC18Q9H819 358 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 BIN2Q9UBW5 565 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 RLFQ13129 1914 aa14.87□□□□□ -0.03
SOX2-OT-240ENST00000626802 H0YGN5 161 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 CAP2P40123 477 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 ZAP70P43403 619 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 FLT3LGP49771 235 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 HMGCS2P54868 508 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 JAG1P78504 1218 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 ATP8B2P98198 1209 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 ITPRIPQ8IWB1 547 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 RNF208Q9H0X6 261 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 GPR108Q9NPR9 543 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 PIH1D3Q9NQM4 214 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 PCDH10Q9P2E7 1040 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 DBNLQ9UJU6 430 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 FLT1P17948 1338 aa14.86□□□□□ -0.03
SOX2-OT-240ENST00000626802 ADCY3O60266 1144 aa14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 FTSJ3Q8IY81 847 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 ZNF280CQ8ND82 737 aa14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 TAOK2Q9UL54 1235 aa14.85□□□□□ -0.03
SOX2-OT-240ENST00000626802 A0A0G2JMZ2 1700 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 PEX10O60683 326 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 GDF11O95390 407 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 MAP4K4O95819 1239 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 INHAP05111 366 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 GJB1P08034 283 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 GJA8P48165 433 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 UBXN2AP68543 259 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 CCDC158Q5M9N0 1113 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 MIER1Q8N108 512 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 PROCA1Q8NCQ7 364 aaPredicted RBP14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 NOL10Q9BSC4 688 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 PLXNA1Q9UIW2 1896 aa14.84□□□□□ -0.03
SOX2-OT-240ENST00000626802 SZT2Q5T011 3432 aa14.83□□□□□ -0.03
SOX2-OT-240ENST00000626802 ZBTB7BO15156 539 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 MTMR2Q13614 643 aa14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 FAM110CQ1W6H9 321 aa14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 UBE2Q1Q7Z7E8 422 aa14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 U2AF1L4Q8WU68 220 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 HERC5Q9UII4 1024 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 PALD1Q9ULE6 856 aa14.83□□□□□ -0.04
SOX2-OT-240ENST00000626802 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
SOX2-OT-240ENST00000626802 PPP4CP60510 307 aa14.82□□□□□ -0.04
SOX2-OT-240ENST00000626802 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
SOX2-OT-240ENST00000626802 NOP58Q9Y2X3 529 aaKnown RBP14.82□□□□□ -0.04
SOX2-OT-240ENST00000626802 FARP2O94887 1054 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-240ENST00000626802 BAG3O95817 575 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms