RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 ARMT1Q9H993 441 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 HERC5Q9UII4 1024 aaKnown RBP24.12■■□□□ 1.45
PNKP-219ENST00000626274 DOCK1Q14185 1865 aa24.11■■□□□ 1.45
PNKP-219ENST00000626274 RNF113AO15541 343 aaKnown RBP24.11■■□□□ 1.45
PNKP-219ENST00000626274 HLA-DOAP06340 250 aa24.11■■□□□ 1.45
PNKP-219ENST00000626274 FSD1Q9BTV5 496 aa24.11■■□□□ 1.45
PNKP-219ENST00000626274 FAM196BA6NMK8 535 aa24.1■■□□□ 1.45
PNKP-219ENST00000626274 CTNND1O60716 968 aaKnown RBP24.1■■□□□ 1.45
PNKP-219ENST00000626274 SCYL3Q8IZE3 742 aa24.1■■□□□ 1.45
PNKP-219ENST00000626274 APPBP2Q92624 585 aa24.1■■□□□ 1.45
PNKP-219ENST00000626274 RNF186Q9NXI6 227 aa24.1■■□□□ 1.45
PNKP-219ENST00000626274 HSPA8P11142 646 aaKnown RBP24.09■■□□□ 1.45
PNKP-219ENST00000626274 PPATQ06203 517 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 TTC6Q86TZ1 520 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 PLEKHM2Q8IWE5 1019 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 CRACR2BQ8N4Y2 399 aaPredicted RBP24.09■■□□□ 1.45
PNKP-219ENST00000626274 EVI5LQ96CN4 794 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 PUS7LQ9H0K6 701 aaKnown RBP24.09■■□□□ 1.45
PNKP-219ENST00000626274 PICK1Q9NRD5 415 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 SAGE1Q9NXZ1 904 aa24.09■■□□□ 1.45
PNKP-219ENST00000626274 DDX60LQ5H9U9 1706 aaKnown RBP24.09■■□□□ 1.45
PNKP-219ENST00000626274 BAZ2AQ9UIF9 1905 aaKnown RBP24.08■■□□□ 1.45
PNKP-219ENST00000626274 ATAD5Q96QE3 1844 aa24.08■■□□□ 1.45
PNKP-219ENST00000626274 PPIL2Q13356 520 aa24.08■■□□□ 1.45
PNKP-219ENST00000626274 METTL16Q86W50 562 aaKnown RBP24.08■■□□□ 1.45
PNKP-219ENST00000626274 SDR42E1Q8WUS8 393 aa24.08■■□□□ 1.45
PNKP-219ENST00000626274 TRIM34Q9BYJ4 488 aa24.08■■□□□ 1.45
PNKP-219ENST00000626274 OSBPL3Q9H4L5 887 aa24.08■■□□□ 1.45
PNKP-219ENST00000626274 TRPA1O75762 1119 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 GTF2A2P52657 109 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 LBX1P52954 281 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 SLC4A8Q2Y0W8 1093 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 OSBP2Q969R2 916 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 DCP1AQ9NPI6 582 aaPredicted RBP24.07■■□□□ 1.44
PNKP-219ENST00000626274 ATP8A2Q9NTI2 1148 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 MCM9Q9NXL9 1143 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 TSKSQ9UJT2 592 aa24.07■■□□□ 1.44
PNKP-219ENST00000626274 TESPA1A2RU30 521 aaPredicted RBP24.06■■□□□ 1.44
PNKP-219ENST00000626274 IRF6O14896 467 aa24.06■■□□□ 1.44
PNKP-219ENST00000626274 PRKAB2O43741 272 aa24.06■■□□□ 1.44
PNKP-219ENST00000626274 POLR3DP05423 398 aaPredicted RBP24.06■■□□□ 1.44
PNKP-219ENST00000626274 MS4A4AQ96JQ5 239 aa24.06■■□□□ 1.44
PNKP-219ENST00000626274 IFNL1Q8IU54 200 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 DDRGK1Q96HY6 314 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 STRBPQ96SI9 672 aaKnown RBP24.05■■□□□ 1.44
PNKP-219ENST00000626274 EHD4Q9H223 541 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 DNAJC18Q9H819 358 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 PRDM10Q9NQV6 1147 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 SERPINB13Q9UIV8 391 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 SLC4A4Q9Y6R1 1079 aa24.05■■□□□ 1.44
PNKP-219ENST00000626274 ALDH1A1P00352 501 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 PTPRAP18433 802 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 CAP2P40123 477 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 SNAPC2Q13487 334 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 OTUD7BQ6GQQ9 843 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 PHIPQ8WWQ0 1821 aa24.04■■□□□ 1.44
PNKP-219ENST00000626274 CCL15-CCL14A0A0B4J2E2 113 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 IGF2BP3O00425 579 aaKnown RBP eCLIP24.03■■□□□ 1.44
PNKP-219ENST00000626274 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
PNKP-219ENST00000626274 CETPP11597 493 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 PLCD1P51178 756 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 CCL15Q16663 113 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 BRI3BPQ8WY22 251 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 KCNH4Q9UQ05 1017 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 CASP8AP2Q9UKL3 1982 aa24.03■■□□□ 1.44
PNKP-219ENST00000626274 TRIM6-TRIM34B2RNG4 842 aa24.02■■□□□ 1.44
PNKP-219ENST00000626274 GPAA1O43292 621 aa24.02■■□□□ 1.44
PNKP-219ENST00000626274 RRP1BQ14684 758 aaKnown RBP24.02■■□□□ 1.44
PNKP-219ENST00000626274 ZMYM1Q5SVZ6 1142 aa24.02■■□□□ 1.44
PNKP-219ENST00000626274 TICAM2Q86XR7 235 aa24.02■■□□□ 1.44
PNKP-219ENST00000626274 ZHX2Q9Y6X8 837 aa24.02■■□□□ 1.44
PNKP-219ENST00000626274 M0R2C6 588 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 CXCL11O14625 94 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 PDE4AP27815 886 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 AMOTL1Q8IY63 956 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 PTPN18Q99952 460 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 PTPRFP10586 1907 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 MYH8P13535 1937 aa24.01■■□□□ 1.43
PNKP-219ENST00000626274 NEFLP07196 543 aa24■■□□□ 1.43
PNKP-219ENST00000626274 GNAT2P19087 354 aa24■■□□□ 1.43
PNKP-219ENST00000626274 TATDN1Q6P1N9 297 aa24■■□□□ 1.43
PNKP-219ENST00000626274 RILPL2Q969X0 211 aa24■■□□□ 1.43
PNKP-219ENST00000626274 SEC62Q99442 399 aaKnown RBP24■■□□□ 1.43
PNKP-219ENST00000626274 GINM1Q9NU53 330 aa24■■□□□ 1.43
PNKP-219ENST00000626274 AFG3L2Q9Y4W6 797 aa24■■□□□ 1.43
PNKP-219ENST00000626274 TBC1D8O95759 1140 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 ASNSP08243 561 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 CYP2D6P10635 497 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 GIMAP6Q6P9H5 292 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 CFHR5Q9BXR6 569 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 TBC1D2Q9BYX2 928 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.99■■□□□ 1.43
PNKP-219ENST00000626274 TAOK2Q9UL54 1235 aa23.99■■□□□ 1.43
PNKP-219ENST00000626274 USP17L5A8MUK1 530 aa23.98■■□□□ 1.43
PNKP-219ENST00000626274 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
PNKP-219ENST00000626274 USP17L12C9JPN9 530 aa23.98■■□□□ 1.43
PNKP-219ENST00000626274 USP17L21D6R901 530 aa23.98■■□□□ 1.43
PNKP-219ENST00000626274 GABPAQ06546 454 aa23.98■■□□□ 1.43
PNKP-219ENST00000626274 GDF11O95390 407 aa23.97■■□□□ 1.43
PNKP-219ENST00000626274 EVX2Q03828 476 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms