RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ZDHHC13Q8IUH4 622 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 GPBAR1Q8TDU6 330 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 MADDQ8WXG6 1647 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 FRMPD1Q5SYB0 1578 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 PLB1Q6P1J6 1458 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 HMX2A2RU54 273 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 GSC2O15499 205 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 IGLV1-40P01703 118 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 GARTP22102 1010 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 LIG3P49916 1009 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 NFIAQ12857 509 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 LLGL2Q6P1M3 1020 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 CYFIP1Q7L576 1253 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 TRIM42Q8IWZ5 723 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 C12orf50Q8NA57 414 aaPredicted RBP5.34□□□□□ -1.55
CDKL5-208ENST00000624953 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 SEMA6CQ9H3T2 930 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 C1GALT1Q9NS00 363 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 PRKAG2Q9UGJ0 569 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 RNF112Q9ULX5 631 aa5.34□□□□□ -1.55
CDKL5-208ENST00000624953 TTF2Q9UNY4 1162 aaKnown RBP5.34□□□□□ -1.55
CDKL5-208ENST00000624953 PTPRGP23470 1445 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 GFRA2O00451 464 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 TFE3P19532 575 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-208ENST00000624953 XPCQ01831 940 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-208ENST00000624953 LRRC14Q15048 493 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 TTBK2Q6IQ55 1244 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 BEND4Q6ZU67 534 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 CCDC84Q86UT8 332 aaPredicted RBP5.33□□□□□ -1.56
CDKL5-208ENST00000624953 DBNDD2Q9BQY9 259 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 STOML1Q9UBI4 398 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 SAMM50Q9Y512 469 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
CDKL5-208ENST00000624953 RIMS1Q86UR5 1692 aaKnown RBP5.33□□□□□ -1.56
CDKL5-208ENST00000624953 RECKO95980 971 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 RLBP1P12271 317 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 CAP2P40123 477 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 CCDC85BQ15834 202 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-208ENST00000624953 CPSF6Q16630 551 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDKL5-208ENST00000624953 ZNF326Q5BKZ1 582 aaKnown RBP5.32□□□□□ -1.56
CDKL5-208ENST00000624953 MAP1SQ66K74 1059 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-208ENST00000624953 SHISA5Q8N114 240 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 RNF214Q8ND24 703 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 ATXN3LQ9H3M9 355 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 UGGT2Q9NYU1 1516 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 TEX14Q8IWB6 1497 aa5.32□□□□□ -1.56
CDKL5-208ENST00000624953 UACAQ9BZF9 1416 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 RICTORQ6R327 1708 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 TNIKQ9UKE5 1360 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 ABCA8O94911 1581 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 FAM221AA4D161 298 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 KIAA1324LA8MWY0 1029 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-208ENST00000624953 DYNC1LI2O43237 492 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-208ENST00000624953 SART1O43290 800 aaKnown RBP5.31□□□□□ -1.56
CDKL5-208ENST00000624953 SLFN14P0C7P3 912 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 ADMP35318 185 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 PDE3AQ14432 1141 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 AKAP4Q5JQC9 854 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 LRFN4Q6PJG9 635 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 FBLIM1Q8WUP2 373 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 KCNB2Q92953 911 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 ZC3H12CQ9C0D7 883 aaKnown RBP5.31□□□□□ -1.56
CDKL5-208ENST00000624953 PCDHB5Q9Y5E4 795 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 MAGI3Q5TCQ9 1506 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 LMTK3Q96Q04 1460 aa5.31□□□□□ -1.56
CDKL5-208ENST00000624953 PCF11O94913 1555 aaKnown RBP5.3□□□□□ -1.56
CDKL5-208ENST00000624953 STRCQ7RTU9 1775 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 FAM95CA0A1B0GW59 222 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 FANCGO15287 622 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 GAS2O43903 313 aaKnown RBP5.3□□□□□ -1.56
CDKL5-208ENST00000624953 F13BP05160 661 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 ITGAEP38570 1179 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 ASPAP45381 313 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 CD97P48960 835 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 LMNB2Q03252 620 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 INPP5AQ14642 412 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 ZBTB37Q5TC79 503 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 FAM214BQ7L5A3 538 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 ZAR1Q86SH2 424 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 FBXO41Q8TF61 875 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 LRRC3Q9BY71 257 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 KIAA1522Q9P206 1035 aaPredicted RBP5.3□□□□□ -1.56
CDKL5-208ENST00000624953 SNCAIPQ9Y6H5 919 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 WDR7Q9Y4E6 1490 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 ABCA9Q8IUA7 1624 aa5.3□□□□□ -1.56
CDKL5-208ENST00000624953 PRR36Q9H6K5 1346 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 PTPRMP28827 1452 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 UNCXA6NJT0 531 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 CILPO75339 1184 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 NFICP08651 508 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 SPINK2P20155 84 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 SSTR4P31391 388 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 TTLL4Q14679 1199 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.29□□□□□ -1.56
CDKL5-208ENST00000624953 DYMQ7RTS9 669 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 UBE3DQ7Z6J8 389 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 ISL2Q96A47 359 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 RAD18Q9NS91 495 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms